Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1540 |
Symbol | |
ID | 5753272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1856751 |
End bp | 1857779 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641287812 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001553973 |
Protein GI | 160874657 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.918796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGCT CACCTAAACT GACTCGCTCA CAACATCCAT TATCACTTGT GGGTGAAGAC AATGGCTTAC AGTGTACTGC GCAGCAAGGC TTGGTCGAGC CCGCATTGCC GTTAACCTTC TTCGAGCATG CCTCGATTGA AACGATTCAA CAGTTTATTC AGCATCTGAC CGAGCCTGTG ATTATCGTCA ATGCCCAAGG TTACATTTAC TTTAGCAATA GCAAAGGTGC TGACTTACTG ACATGCCCGC AGGCCAGTTT GAAGGGACAA GATTGGCGCA ACTTTTTGAC CGAGCACCAT CAAGCTCGCT ACGACAATCT GCTGAGCAAT GATATTAAAC TAGGCAAAAA CTGCGGCATT CCAGTGCAGC ACTGCGCCGA AGAAATCACC CTCATTACCG CCTCAGGCAA AGCAAAAGAT GTCGAACTTT CCATTTCCTA CATCCCCAGC CATGAACCTC TGTTCGTGAT GATGATGCAC GATTTAACGC AGCACAAAGC GGAGAATCAA AAGCTACGTA AATTGGCCGC CACGGATTCG CTGACTGGGC TGGCGAACCG CCGATACTTC GACGAAATGC TGCATCACTA TTGGGAAGAA TGCACAGGTA AGCTGCGCCC TATCAGCGTG GTGATTATCG ATGTGGATTA TTTCAAAGTG TTCAACGACC AATTCGGCCA TATCCAAGGC GACGAATGTC TACGTAAGAT TGCCAAAGTG ATTGCTGACA TAGTGCCAAT AGACATTGGC CTGGCAGCGC GTTACGGCGG TGAAGAATTC GCGCTAATAC TACCAAGCCA CAATGCCAAA ATGGCACTGA CGATTGCCCA AAAAGTGCAG CAAGGGATTA ATGACCTGCG CTTTACTGAG CAAGGGCTGC GCGACTATGT CTCTGTGAGC GCGAGCCAAG GGATTGCGAG TGAAATCAAT GGCCAGTTCC GTACCTCACT CGCCATGCTG TGCGCCGCTG ATACCGCATT GTATCGAGCC AAAGCCGATG GCCGTGACAG GATCAATACG TCGCTTTAA
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Protein sequence | MTSSPKLTRS QHPLSLVGED NGLQCTAQQG LVEPALPLTF FEHASIETIQ QFIQHLTEPV IIVNAQGYIY FSNSKGADLL TCPQASLKGQ DWRNFLTEHH QARYDNLLSN DIKLGKNCGI PVQHCAEEIT LITASGKAKD VELSISYIPS HEPLFVMMMH DLTQHKAENQ KLRKLAATDS LTGLANRRYF DEMLHHYWEE CTGKLRPISV VIIDVDYFKV FNDQFGHIQG DECLRKIAKV IADIVPIDIG LAARYGGEEF ALILPSHNAK MALTIAQKVQ QGINDLRFTE QGLRDYVSVS ASQGIASEIN GQFRTSLAML CAADTALYRA KADGRDRINT SL
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