Gene Sbal195_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1538 
Symbol 
ID5753270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1853025 
End bp1853903 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content49% 
IMG OID641287810 
Producthypothetical protein 
Protein accessionYP_001553971 
Protein GI160874655 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.746506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCT CAGCTTTAGC TATCATTTTT GCCCTATTGG CGGCCATTCT TATGGGCACA 
ATCGGTGTAT TAGCGCGCTT TGCCGCCCTG CCCGCCGAGC ACATTACCTT CTACCGCTTA
CTGCTCGGTG CCCTATTTCT ATTGGCTTAT ATGCTGCTCA CAGGTAAAGG CCATCAGATT
CGCCATAGAC CCAGCAAACG CAACTTAGTG AATGGCATTA TGCTCGCGGG TTTTATGGCG
TTTTACATTG AAGCCATTCA GTACACCCAA ATGGCCAATG TGATCATGAT TATTTACTTA
GCCCCAGTGG TGTCGGCTAT TTTCGCCCAT TATTTCTTTG CCGAAAAACT CACCCGCTTA
AGCATGGCAA GCGTAGTGGT CGCGCTGATG GGCTTTATGT TAATGATCCC AACAGGGCCG
CAGCAAGCGA GCAATCACAC TGAATTATTA GGCTATTTTT ATGCCCTACT CGCCCTATTA
ACCTACAGCG GGTTTATGTT AATTAACCGA AAACCGAGTC TGAGTTCGCC CTATCAGAGC
ACTTTAGTGC AGCTTTGTAT CGGCGCTTTA TGCCTACTGC CCTTTGTGAT AAATGCACCG
CTGACGCCAA GTTTGCCGCA AATTGCTTGG TTGGTCGCGA TTGGATTCTT CCCCGGATTT
TTAGCAATAT TACTGGCAGT AAAAGCCCTG CGGCAATTGC CTGCAGTCAC CTTTGGCACC
CTCGCCTATG TGGAACCGGT TATCGTAGTG ACGCTGGCAT GGTGGATATT TGGTGAAACC
TTGAGCCCAA TTCAATTAAG CGGTGTCGGC TTGATTATTC TGGCCGGCAT TAGCCAAGGC
TTTATCAGTC AGCGCAAAGT GCGGGTTGCG AGCGAGTAA
 
Protein sequence
MPSSALAIIF ALLAAILMGT IGVLARFAAL PAEHITFYRL LLGALFLLAY MLLTGKGHQI 
RHRPSKRNLV NGIMLAGFMA FYIEAIQYTQ MANVIMIIYL APVVSAIFAH YFFAEKLTRL
SMASVVVALM GFMLMIPTGP QQASNHTELL GYFYALLALL TYSGFMLINR KPSLSSPYQS
TLVQLCIGAL CLLPFVINAP LTPSLPQIAW LVAIGFFPGF LAILLAVKAL RQLPAVTFGT
LAYVEPVIVV TLAWWIFGET LSPIQLSGVG LIILAGISQG FISQRKVRVA SE