| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1399 |
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| Symbol | |
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| ID | 5753128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1674924 |
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| End bp | 1677086 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641287669 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001553833 |
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| Protein GI | 160874517 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.405164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00313663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAAAAC TCACGGTTAT TTTATTTACT TTGTTGCTGT CACTGCCTTT TAGCGTTCAA
AGCCGAGATC TCGAAGCTGA TGAGGTGGAG TTAAGAGAAT CGCCACAGCA AATGTATGAT
GTACTCAACA AATCCATTTC CTTCCCCCTT GCGTTCCAAA ACCGTGACCA ATTTGAGCGT
GCAGCCCAAG AACAAGGCTA CAGCCCAATC GAATTTGAAC AGATTTTGTA TCTGCTGACT
CGGCTGAATA TGGAGCCGAA CGTGAAAACT AAGGTCGGTT TTCAAGACGC AAAAAGCTTG
ATTGAACTCT TATCCACTGC GGCGCAATCG CCCTACGAAC TGGCTATGGT CGCCATGTTG
AATGGTCGTT ACCTTGGCCG TACCGAACAG AAATATCAAG AAGCGATTGG CCTATATAAT
GAAGCGCTCA CTCGCATCAA CGACAGTTAT GACATCGAAG CATTGATTCT TAAGCACAAT
ATTCATGAGC ACTTAGGCGG CTTACATTTA TTGATCCGTC AAGAAGTACC GGCGCTGATG
CACTTCCATA CATACCGCGA CATTGCCTAT AAGCTCAGAA ACGATTACTT AATCGCGGCG
GCTGAAGCAA GACTGGGGTT CTATTACAAT TTTAATCAGC AGCTCACCAA ATCATTGCAG
CATTACAATG AAGCGATTCG GATCTCCAAT CGTTCTAATT ACCCGGCGAT GAAAACCAAT
CTGCAATTGC AACTTTCTAA GGTATATCGC GATTTAAAGC AGTGGGATGA AGCCCTTAAA
AATGCCCACG AAGCCGCTGC CGGTTTTAAA AAAATGGGCA ATGACACCTA TCTTTCAAGC
TGTATGACAG TAATCGCTAT GGTGTATGGC GAACAAGGGG ATTGGAATAA AGCGATTGAT
TACTACCTTA ATGCCCAGCA ATTAGATGCC AAACGCGGTA ACTATATTGC CCAAGGCCTT
AATTTCCACA ATCTTGGGCA AGCCTACTCA AATATTAATG ACAATGTTAA CGCCCTAAAA
TATTTACTGA TGGCCAATCA AATATTCAAA GAAAAACAAA GCCATCACTA TCAGGTTTAT
AACGAACTCT TAATTGGCGA AATCGCACAA ACCAACCAAG ATTGGCCGCT AATGATGACC
CATGCCGACA TCGCATTGGC ATTGGCTATC GACTTAAAAC TCGTCAATGA ACAAAAAGCC
GCGCTCACAC TGATTGCCTC GGCGTCGCAA AAATTAGGGG AATTAACCAA AACCATCGAT
GCCCAAACCC GTATCATAGA GCTAGGTAAC ACCCTTGCAG AGAAAGAGAA AGACTCCCCA
GTGTCGACCT CAGCCCTTGC GGAGCAACAG CTCAAACTTG AGCTCAACAT GGTTCAGGGA
AAACTTGCCG AGACAGTGAA GGAAAGCAAC AGCACCCACA CGCTACTGCT CATCAGCTGC
CTCATTGCCG GACTCTTACT GCTGGTGATT GCGTATATGT TGCATCATCG CCGCAAAACC
ATGGCAAAAA ACGCCGCATT AACTCAATTG AGCCTACAGG AACCCTTCAC CCATAACTTA
GGCTATGCGG CGCTATTAGC GCACTTAAGC TATAATCAAA CTCAAGCGTC GACGACTGCC
CTAGGGATTA TCGCCTTCCC CGCCCAGCTC ACGACCGACC TCGACTATGG CCAATATTTT
AGTGATGCAG TAACAGCGCA ACTGGCCACT CATCTAACCG ATGCGCTCGC AGCACCTGTG
TATGTGATAC GCCAAGGGGT ATTTGCAGTG CGTTTCACCC AAGCCGTTGA GCCAACGCAC
GTGCTCAGCC AAATACGCCA GAAACTCGAC CAACAGCACA TCGTCCATCA TTTCCGGCTT
GGTTTTGCCA ACTTGCCACT GTTAGCGAAA TCAGAAATCA AAATGGCCGC AAAATTAAAG
TTCGAAACCG TGCAGATGGC GCTCGCCTGT GCCCGCAGTT TAGAGGGCAA TAACGATTAT
TTTGTCGCCC TCAGAGCACT CGATTTTGTC CCTCTAAGCT TATTTGCCAA TCCGTTATTT
TTACACCTTG AAAAAGGCAT TGAGCGCGGG TTAATCAGAT TAGATACCAA CGGAAATAAA
GAAGATGTTC GCTGGCCTTG CTGGGAAAAT AACCAAGATA GGCAATTACT GGAAAATATT
TGA
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| Protein sequence | MQKLTVILFT LLLSLPFSVQ SRDLEADEVE LRESPQQMYD VLNKSISFPL AFQNRDQFER
AAQEQGYSPI EFEQILYLLT RLNMEPNVKT KVGFQDAKSL IELLSTAAQS PYELAMVAML
NGRYLGRTEQ KYQEAIGLYN EALTRINDSY DIEALILKHN IHEHLGGLHL LIRQEVPALM
HFHTYRDIAY KLRNDYLIAA AEARLGFYYN FNQQLTKSLQ HYNEAIRISN RSNYPAMKTN
LQLQLSKVYR DLKQWDEALK NAHEAAAGFK KMGNDTYLSS CMTVIAMVYG EQGDWNKAID
YYLNAQQLDA KRGNYIAQGL NFHNLGQAYS NINDNVNALK YLLMANQIFK EKQSHHYQVY
NELLIGEIAQ TNQDWPLMMT HADIALALAI DLKLVNEQKA ALTLIASASQ KLGELTKTID
AQTRIIELGN TLAEKEKDSP VSTSALAEQQ LKLELNMVQG KLAETVKESN STHTLLLISC
LIAGLLLLVI AYMLHHRRKT MAKNAALTQL SLQEPFTHNL GYAALLAHLS YNQTQASTTA
LGIIAFPAQL TTDLDYGQYF SDAVTAQLAT HLTDALAAPV YVIRQGVFAV RFTQAVEPTH
VLSQIRQKLD QQHIVHHFRL GFANLPLLAK SEIKMAAKLK FETVQMALAC ARSLEGNNDY
FVALRALDFV PLSLFANPLF LHLEKGIERG LIRLDTNGNK EDVRWPCWEN NQDRQLLENI
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