| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1392 |
|---|
| Symbol | |
|---|
| ID | 5753121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1664859 |
|---|
| End bp | 1665944 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641287662 |
|---|
| Product | putative RNA 2'-O-ribose methyltransferase |
|---|
| Protein accession | YP_001553826 |
|---|
| Protein GI | 160874510 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.14672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC TATTTTTATT TTGCCGCGCA GGCTTTGAAA AAGAATGCGC TGCAGAAATC
CAACAGCGAG CCGGTGAGCT CAATGTGGGT GGCTTTGTTA AGGCCAACAA TAACGACGCC
TATGTCGTGT ACCAATGTTT TGAAGATGAC GCCGCAGATA CGTTAGTGAA ACAACTGCCC
TTAGATTCGC TCATTTTCGC TCGCCAGATG TTTGCTGCCA GCGACTTATT AGTCGACTTG
CCTGAAAATG ACAGAATTAG CCCAATCGTG GCGGCACTCA GTGACGTCAG CAAAGCGGGC
GAAGTGCGGG TTGAAACGCC AGATACTAAC GAAGCGAAAG AGCTATCGGC TTTTTGCCGT
AAGTTCACTG TGCCTTTACG CCAGCATTTG AAAAAATCTG GCAGTTTGCT CGCGCAGGAA
AATCCAAAAC GTCCGATTAT CCACGTGTGT TTTATCGGAC CCGGCCGTGC CTATGTGGGT
TATTCCTACA GCAATAACAG CTCGCCACAT TTTATGGGTA TTCCACGTCT GAAAATGGCG
GCGGATGCTC CGAGTCGTTC TAGCCTGAAA CTCGATGAAG CCTTTGGCCA GTTCGTGCCT
AAGGAAGAGC AAGAAGAGCG TATTCGCAGT GGCATGAACT CAGTGGATTT GGGCGCTTGT
CCAGGTGGCT GGACTTATCA ACTGGTGCGT CGTGGCATGT TTGTCTCGGC TGTCGATAAT
GGTCCCATGG ATGAAAAACT GATGGAAACG GGCCAAGTGA AACATTACCG TGAAGACGGT
TTCCGTTTCG AGCCACAGCG CAAAAATATC TATTGGCTAG TGTGCGACAT GGTTGAGAAA
CCAGCGCGCG TTGCCGAACT GATTGAAGCT TGGGCGATTA ACGGTTGGTT TAAGGAAGCG
ATTTTCAACC TTAAATTACC GATGAAGAGC CGCTATAAAG AAGTCACTGC CATTCTTGAG
ACCATGCAGA CCATTCTTAA AGAAAATGGC GTGAGCGATT TTAAAGTGCA GTGTAAGCAT
CTTTATCACG ATCGTGATGA AGTGACAGTG CATTTATGGC TGCGTCCTAA TACCGCGTGG
AATTAA
|
|---|
| Protein sequence | MKNLFLFCRA GFEKECAAEI QQRAGELNVG GFVKANNNDA YVVYQCFEDD AADTLVKQLP
LDSLIFARQM FAASDLLVDL PENDRISPIV AALSDVSKAG EVRVETPDTN EAKELSAFCR
KFTVPLRQHL KKSGSLLAQE NPKRPIIHVC FIGPGRAYVG YSYSNNSSPH FMGIPRLKMA
ADAPSRSSLK LDEAFGQFVP KEEQEERIRS GMNSVDLGAC PGGWTYQLVR RGMFVSAVDN
GPMDEKLMET GQVKHYREDG FRFEPQRKNI YWLVCDMVEK PARVAELIEA WAINGWFKEA
IFNLKLPMKS RYKEVTAILE TMQTILKENG VSDFKVQCKH LYHDRDEVTV HLWLRPNTAW
N
|
|---|
| |