Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1389 |
Symbol | |
ID | 5753118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1662693 |
End bp | 1663604 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641287659 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_001553823 |
Protein GI | 160874507 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.13608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAC GATTACCACC GCTTAATGCG GTTAAAGCAT TTGAGGCAGC TGCGCGGCAT TTGAGCTTTA CGCGCGCAGC AGAAGAATTG TTTGTTACGC AAGCTGCGGT GAGCCATCAA ATAAAGGCAT TAGAAGATTT CCTCGGATTA AAATTATTTC GCCGAAAGAA CCGTTCTTTG CTTTTAACTG AAGAAGGGCA GAGCTACTTC CTCGACATCA AAGACATCTT TATTCAACTC GCCGATGCTA CCGACCGATT ACTCGCCCGC AGTGCGATTG GTTCTCTGAC GGTCAGTATG TCGCCCAGTT TTGCAATTCA ATGGTTAGTG CCGCGTTTGG CAAAGTTCAG TGAGAAAAAT CCCGATATCG ACGTGCGTAT TAAAGCCGTC GATACCGAAG CGAGCTCATT AACCGATGAT GTGGATGTCG CCATTTATTA TGGTCTAGGC AATTGGCCTG GTCTGCGCGC CGATAAGCTC AGAAACGAAG TGCTCATTCC TGTGTGTTCG CCCATGTTAC TCAATGGCCC TAAGCCGCTG TCAAAACCGA GCGATTTAAA ATATCACACG CTATTACATG ATATGAATCG TCACGATTGG CAGGCGTGGT TTAGACAATG TGGGATTAAC GATATTAATG TGAACCAAGG CCCCATCTTC AGTCATTCGT CCTTGGTATT GCAGGCGGCG GCCCATGGTC AAGGCGTGGC TTTAGGTTAC AGCGTACTGG CGCGTCCCGA TATAAAAGCG GGGCGTCTTG TGTGCCCATT TCAAGAAGTC TTGGTCAGTA AAGATGCTTA CTACTTGGTT TGCCAGCAGA ATCACGCAGA ACTGGGTAAG GTCGTCGCGT TTCGCGAATG GATGTTAGAC ATGTTTGCTG AGGAGTCGCG CAGTGAGTTG TTGCCCGGAT AA
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Protein sequence | MSRRLPPLNA VKAFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEDFLGL KLFRRKNRSL LLTEEGQSYF LDIKDIFIQL ADATDRLLAR SAIGSLTVSM SPSFAIQWLV PRLAKFSEKN PDIDVRIKAV DTEASSLTDD VDVAIYYGLG NWPGLRADKL RNEVLIPVCS PMLLNGPKPL SKPSDLKYHT LLHDMNRHDW QAWFRQCGIN DINVNQGPIF SHSSLVLQAA AHGQGVALGY SVLARPDIKA GRLVCPFQEV LVSKDAYYLV CQQNHAELGK VVAFREWMLD MFAEESRSEL LPG
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