| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1323 |
|---|
| Symbol | |
|---|
| ID | 5753051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1572314 |
|---|
| End bp | 1573036 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641287593 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001553758 |
|---|
| Protein GI | 160874442 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00403322 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGAG CATATCAAAA CAAGAAAGAA TCCATGGCGA AAACAGCCGG TCAAAAAACC
CGCATTTATT CACGCTACGG TAAAGAGATT TACGTTGTCG CTAAACAAGG CGGCGTTGAG
CCCGATGGAA ACTTATCACT GCGTCGCTTG ATTGAACGCG CTAAGAAAGA CCAAGTGCCT
GCGCATGTTA TTGAACGCGC AATTGAAAAA GCCAAAGGCG GCGGTGGTGA AGATTACGAT
ACCGCCCGTT ACGAAGGTTT TGGTCCTGGC AACTGCATGG TCATTGTTGA CTGCTTAACC
GATAACGTAA AACGTACCTT CACCGAAGTC CGTCAAGCCT TCGTGAAAAA CGATGCCAAA
CTCGGCGGCC CAGGCACTGT TGGCCACATG TTTGATCATC AAGCCGTGTT CGTGTTTGCC
GGTGATGACG AAGATGCGAT TTTAGAACTG CTGATGATGG CTGACGTTGA TGTGAGCGAT
GTTGAGCTGG AAGATGGCTT AATCACAGTT TATGCGCCGC ACACTGAGTA CTTTAAAGTT
AAAACTGCAC TGACCGAAGC AATGCCAGAG GTTAACTTCG AATTCGACAA CATCACCTTC
GTACCGCAGG ACATGACTAA GGTTGAAGGT GAAGATGTGG CCATGTTTGA AAAGTTTATC
GCCGCTTTAG AAGATTGTGA CGACGTACAA AACGTCTATC ACAATGCGGA AATTGAAGAC
TAA
|
|---|
| Protein sequence | MGRAYQNKKE SMAKTAGQKT RIYSRYGKEI YVVAKQGGVE PDGNLSLRRL IERAKKDQVP
AHVIERAIEK AKGGGGEDYD TARYEGFGPG NCMVIVDCLT DNVKRTFTEV RQAFVKNDAK
LGGPGTVGHM FDHQAVFVFA GDDEDAILEL LMMADVDVSD VELEDGLITV YAPHTEYFKV
KTALTEAMPE VNFEFDNITF VPQDMTKVEG EDVAMFEKFI AALEDCDDVQ NVYHNAEIED
|
|---|
| |