| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1322 |
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| Symbol | |
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| ID | 5753050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1570582 |
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| End bp | 1572252 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641287592 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_001553757 |
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| Protein GI | 160874441 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00487019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAGAC GTCAATTTCT AGCAGGCTCA GCCGCCCTAA TGACGACCGC AGTTTGGGCA
AGTTCAGTTG ATAAATTACT GGCGCTGGAT AACGCACAAG CGGTCGCCCG TGAGCCATGG
GCCATAGGTT TTAACGGGGC GGAAGGCGAC TATCAGCCGC TCACTATGCA GGTTTCGGGC
GAATGGCCTG CACAATTGAG CGGCAATCTA TATCGTAATG GGCCTGCAAA AATGTCTCGG
GCAGGTAAGG CATATCAACA TTGGTTCGAT GGCGATGGCA TGGTGCAGCA GTTTAGTGTG
GTTAATGGGC AAATTCAGCA TCAGGCTAAG TTTATCCAAA CAAAGAAGTT TAAAGTGGAG
GAGGCCGCTG GCGCATTTAA GTACACCACC GCAGGCACAG TGATCCCTAA TGCTTTACCC
ATTCGCAATA ACGATGACTT GAATGTGGCT AACACCAGTT TATTACCGCG CCACGGCGAG
TTGCTCGCTT TGTGGGAAGC GGGTTCACCC TATCGACTCG ATGCGCAGAC CTTAACCACG
CTCGGTGTTA AAAGCTTTGG CGACAAGTTT AAGGGCTTAC CCTTTTCCGC CCATCCACTC
GATGATGGAC AAGGTGGATT GTGGAATTTT GGCGTCTGGT ATGTCGGCGG CGAGAAGCAA
TTACTTGTGT ATCAAGTGGC AGCCGATGAC AGCATTGCCA GAATGGAAGT GATTGAATTA
CCACAGGCGA GTTATTTACA TGCCTTCGCG CAGAGTGAAA ATAAGCTGGT GTTTTATATT
TCATCTTGCG TGTATGAAGA GGGCGAAACT TATATCGATG CTTTTAAATG GCGCCCAGAA
TTGCCATCGC AATTACTGGT TATCGACAAA GCCGACTTTA AAGCGCGCCA GTTACACCCG
CTGCCTGCAG GATTTGTGTT TCACTTTGGC CAAGCCATTG AGAAGAATGG CGAACTATCA
GTGCAACTTT GCCTCTATCC CAATTCGGCA ATTTTAACTC AAGGGATGAA GGGGTTACTC
ACGGGCGCCC GTAAAACAAA AACACCCCAT GCCGAGTTAG TGACGATCAC AGTACCGCTA
ACCGCACCAC TTACAGCTAC TAGCAAAACG CAGCTTGCAG AGACCTTGCC TTCTTCTGCA
CGAATTAACC GCAGCGGCGT GATGATGGAG TTCCCCCAGT TTGCGCAGCA AACTATGAGT
AACAAAGAGT CTGCACAGCA AACGAGCAAT GCCGAAAAGC TTGCAGAGAA AACGGGTGGG
GCTTCGGAAT TTGTCCCGTT ATTTGGCGTT GGAGCAAGAT CAGACTCTGC TGCTAATTCT
GGTGCTAATT CTAACTTTAA ATATGAAGCC GAATCTGAAT CAGGACTGAG TAATACTCTG
TATTGTATTC ATAATGCAAA AGACAGCAGC CAGCACGGTG TGGATACACT TGGCGACGCG
AGCTATAGCG CGTTTTATCT TGGCAAAGGC AAGATTGCCG AAGAGCCGCT CTATATCCCC
GCCACTGAGC AGCATGAAGC CTATTTGTTG ATGACTTGGC TCGATTACCA CAATGCACAA
TCTGGCTTGT CTTTGTTTCG TGCCAGCGAC ATCAGTGCGG GACCCATTGC TTCGGCTCAT
ATGAACAGGG TATTGCCGTT AGGGTTTCAC GGTTGTTTCA TTAACGCTTA A
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| Protein sequence | MDRRQFLAGS AALMTTAVWA SSVDKLLALD NAQAVAREPW AIGFNGAEGD YQPLTMQVSG
EWPAQLSGNL YRNGPAKMSR AGKAYQHWFD GDGMVQQFSV VNGQIQHQAK FIQTKKFKVE
EAAGAFKYTT AGTVIPNALP IRNNDDLNVA NTSLLPRHGE LLALWEAGSP YRLDAQTLTT
LGVKSFGDKF KGLPFSAHPL DDGQGGLWNF GVWYVGGEKQ LLVYQVAADD SIARMEVIEL
PQASYLHAFA QSENKLVFYI SSCVYEEGET YIDAFKWRPE LPSQLLVIDK ADFKARQLHP
LPAGFVFHFG QAIEKNGELS VQLCLYPNSA ILTQGMKGLL TGARKTKTPH AELVTITVPL
TAPLTATSKT QLAETLPSSA RINRSGVMME FPQFAQQTMS NKESAQQTSN AEKLAEKTGG
ASEFVPLFGV GARSDSAANS GANSNFKYEA ESESGLSNTL YCIHNAKDSS QHGVDTLGDA
SYSAFYLGKG KIAEEPLYIP ATEQHEAYLL MTWLDYHNAQ SGLSLFRASD ISAGPIASAH
MNRVLPLGFH GCFINA
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