Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1320 |
Symbol | |
ID | 5753048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1568711 |
End bp | 1569874 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641287590 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001553755 |
Protein GI | 160874439 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0173853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000998378 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCTAGAAA ATCGATTAGC AAAAGAAGAG AGCATGTTAA TTGCCGCAGG AGTGCTCACT TGGGCATTAG TGGCTTGGGT TGGGATAAAC CAAGCCGCAT TGCATACATG GCAAGGCATG CTCAATGCCA CGCTTTATGG GCTGTATTTA GTGCAATTTA TACTGATAGC TACCGATAAA GTTGCGCATA ACAATATTCT GTTTCGTCGC CTTGCCACAC TAGCAATGCC GTTGATCGTG TTGAGCTTAT TGCTCACGGT AAACCATGCA TTGCTGCCGA TCCTCTTCGT TATTTGGGCG TCACTTTTGC CTGAGTTTTT TAATCGCCGC CAAGCCATTT CGCAGTTACT GTTAGCCAAC ATGGTTTATT ACGCGCTGCT GCAATGGCAT TTGCATGAGC AAAGCAATGT GTTCAATATT TTGATCTATC TTGGCTTTCA ATTCTTTGCC TACAGCAGCA GCCAAGCAAG GCTTTCCGAG CGTAAATCAC GTTTGATACA AGAACAGCTA AACCAACAGC TTATCGCCAC TCGCGCCCTA CTTAGCCAAG CCAGCGAACA GCAAGAAAGA TTAAGGATCT CCCGCGATTT GCACGACATT CTCGGCCACC AGCTCACAGC ACTCTCTCTG CAATTAGAAG TACTGAGCCA TAAAGCGCCC GAAGACCTCA AACCTCAAGT TAACCAAAGT AAATCCTTAG CCAAAGAGCT ACTTGAAAGT ATTCGCGCCG TCGTCAGGGC TCAAAGAGTG CAAGTGGGAT TGGATTTAGT CCCACCTTTA GAGGCGCTGA TGACCCGCTT ACCCAGCGTC ACTCTTACCT GCAAGACGAT GAAACCACTG CAATCAGCCG AACTGACTCA AGCCCTGCTG TTAGTCCTGC AAGAAGGCAT CAGCAACGCC GTGCGCCACG GCAAGGCGAA TCAACTGCAA CTGAGCATGG AAGACTCGCA AAACGCACTG GTATTGCAAC TGAGCGACAA CGGCGTGGGA CTAACGCGGG TAGCCGCGCG AAACGCATCA GCTAAAAGCG GCACAGGACT TTATGGCACA GGGCTTAGCG GCATGCAGGA AAGACTGCAA CCTTTTAATG GCAAGGTGCA GCTAAGGGCG AATGACTTGG CGCCCGGCTG CCAACTCACA CTCACCCTCC CAGCACTCGC TTAA
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Protein sequence | MLENRLAKEE SMLIAAGVLT WALVAWVGIN QAALHTWQGM LNATLYGLYL VQFILIATDK VAHNNILFRR LATLAMPLIV LSLLLTVNHA LLPILFVIWA SLLPEFFNRR QAISQLLLAN MVYYALLQWH LHEQSNVFNI LIYLGFQFFA YSSSQARLSE RKSRLIQEQL NQQLIATRAL LSQASEQQER LRISRDLHDI LGHQLTALSL QLEVLSHKAP EDLKPQVNQS KSLAKELLES IRAVVRAQRV QVGLDLVPPL EALMTRLPSV TLTCKTMKPL QSAELTQALL LVLQEGISNA VRHGKANQLQ LSMEDSQNAL VLQLSDNGVG LTRVAARNAS AKSGTGLYGT GLSGMQERLQ PFNGKVQLRA NDLAPGCQLT LTLPALA
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