Gene Sbal195_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1320 
Symbol 
ID5753048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1568711 
End bp1569874 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content50% 
IMG OID641287590 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001553755 
Protein GI160874439 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0173853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000998378 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTAGAAA ATCGATTAGC AAAAGAAGAG AGCATGTTAA TTGCCGCAGG AGTGCTCACT 
TGGGCATTAG TGGCTTGGGT TGGGATAAAC CAAGCCGCAT TGCATACATG GCAAGGCATG
CTCAATGCCA CGCTTTATGG GCTGTATTTA GTGCAATTTA TACTGATAGC TACCGATAAA
GTTGCGCATA ACAATATTCT GTTTCGTCGC CTTGCCACAC TAGCAATGCC GTTGATCGTG
TTGAGCTTAT TGCTCACGGT AAACCATGCA TTGCTGCCGA TCCTCTTCGT TATTTGGGCG
TCACTTTTGC CTGAGTTTTT TAATCGCCGC CAAGCCATTT CGCAGTTACT GTTAGCCAAC
ATGGTTTATT ACGCGCTGCT GCAATGGCAT TTGCATGAGC AAAGCAATGT GTTCAATATT
TTGATCTATC TTGGCTTTCA ATTCTTTGCC TACAGCAGCA GCCAAGCAAG GCTTTCCGAG
CGTAAATCAC GTTTGATACA AGAACAGCTA AACCAACAGC TTATCGCCAC TCGCGCCCTA
CTTAGCCAAG CCAGCGAACA GCAAGAAAGA TTAAGGATCT CCCGCGATTT GCACGACATT
CTCGGCCACC AGCTCACAGC ACTCTCTCTG CAATTAGAAG TACTGAGCCA TAAAGCGCCC
GAAGACCTCA AACCTCAAGT TAACCAAAGT AAATCCTTAG CCAAAGAGCT ACTTGAAAGT
ATTCGCGCCG TCGTCAGGGC TCAAAGAGTG CAAGTGGGAT TGGATTTAGT CCCACCTTTA
GAGGCGCTGA TGACCCGCTT ACCCAGCGTC ACTCTTACCT GCAAGACGAT GAAACCACTG
CAATCAGCCG AACTGACTCA AGCCCTGCTG TTAGTCCTGC AAGAAGGCAT CAGCAACGCC
GTGCGCCACG GCAAGGCGAA TCAACTGCAA CTGAGCATGG AAGACTCGCA AAACGCACTG
GTATTGCAAC TGAGCGACAA CGGCGTGGGA CTAACGCGGG TAGCCGCGCG AAACGCATCA
GCTAAAAGCG GCACAGGACT TTATGGCACA GGGCTTAGCG GCATGCAGGA AAGACTGCAA
CCTTTTAATG GCAAGGTGCA GCTAAGGGCG AATGACTTGG CGCCCGGCTG CCAACTCACA
CTCACCCTCC CAGCACTCGC TTAA
 
Protein sequence
MLENRLAKEE SMLIAAGVLT WALVAWVGIN QAALHTWQGM LNATLYGLYL VQFILIATDK 
VAHNNILFRR LATLAMPLIV LSLLLTVNHA LLPILFVIWA SLLPEFFNRR QAISQLLLAN
MVYYALLQWH LHEQSNVFNI LIYLGFQFFA YSSSQARLSE RKSRLIQEQL NQQLIATRAL
LSQASEQQER LRISRDLHDI LGHQLTALSL QLEVLSHKAP EDLKPQVNQS KSLAKELLES
IRAVVRAQRV QVGLDLVPPL EALMTRLPSV TLTCKTMKPL QSAELTQALL LVLQEGISNA
VRHGKANQLQ LSMEDSQNAL VLQLSDNGVG LTRVAARNAS AKSGTGLYGT GLSGMQERLQ
PFNGKVQLRA NDLAPGCQLT LTLPALA