| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1252 |
|---|
| Symbol | |
|---|
| ID | 5752980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1487063 |
|---|
| End bp | 1488052 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641287522 |
|---|
| Product | cobalamin biosynthesis protein CbiB |
|---|
| Protein accession | YP_001553687 |
|---|
| Protein GI | 160874371 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.196954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCT CTTTTTATCA ACAACTTGTC GAGATAGATG GCGCTTTGTT TGAAGGCTTT
TTGGTACTTT TTTTTGCTTT GTTATTGGCG CGGTTAGCGC CATTGCCACG TGAAATGCAG
CCGCTTATTT GGTTTGGCCA TTTAGCTAAG CAACTCGCCG CCAAGGTAAA TCGTCCAGAA
CGCTCTCCAA GCCAACAAGC CACAGCAGGC TTTTTAGCTA TGATGCTGTT ACTGTTTCCG
TTTTGGGCCA TTATCACCTT TTTGCTCGAA CTGGCCGCCT TTCCATGGTT TTTCGAATTT
TTGGTGCTTT ATCTATGCTT AACCGATGCA GGGTTTAGCC AAGTCGCCGA TGAAATCGCT
AAAGCCTTAA AACGTGGAGA CAATGCCAGC GCAAAAAAGC TTTTACAGCC TTGGGTAGTG
CGCGATACCG ATAGTTTGTC GGAAATCGGC CTAGCCAAAG CTACCATAGA AAAACTCGCC
ACAGCGCCTA TTTACGGCAC AGCATTAACC ATTTTCTTTT TCGCTATCGC CGGAGCACCG
CTAGTGCTGG CGGTGCGTAT GCTCAAACAA CTCGAATTGA GCTGGCCGCC CATTCAGCCT
AAGTATCAAC ATTTTTGCAG TACTGTGAAT GGCGTATCGA CCCTCTTACT GGCGATCCCC
GCTTGGCTGT GGAGTCTATC AATTGCCATT CAAGGCGGCC CTAAGGCATT CGCTAAGCTA
TTTCGTACGC CAAAAAATCA TCCCGCGATT CGAGGCTATA TCCTCAGTGT GAATCTGGTG
GCGAGTATTT TACGCATCGA ACTCGGTGGA CCTCAAAAGT TTAATGGCGT GCGTATCAAT
GTGGACAAAC TAGGTTATGG CCCGCAGCCG ACCAGTGATG CCATCGCCCC AGCAATCAAG
CTGACCTCAC GCGCCTGTGC CATCTGGTTT AGCTTTATCA TTATCCTGCC CTTGTTATGG
GCAGGTTTAC GTTGGTTACA TAGCCTGTGA
|
|---|
| Protein sequence | MHTSFYQQLV EIDGALFEGF LVLFFALLLA RLAPLPREMQ PLIWFGHLAK QLAAKVNRPE
RSPSQQATAG FLAMMLLLFP FWAIITFLLE LAAFPWFFEF LVLYLCLTDA GFSQVADEIA
KALKRGDNAS AKKLLQPWVV RDTDSLSEIG LAKATIEKLA TAPIYGTALT IFFFAIAGAP
LVLAVRMLKQ LELSWPPIQP KYQHFCSTVN GVSTLLLAIP AWLWSLSIAI QGGPKAFAKL
FRTPKNHPAI RGYILSVNLV ASILRIELGG PQKFNGVRIN VDKLGYGPQP TSDAIAPAIK
LTSRACAIWF SFIIILPLLW AGLRWLHSL
|
|---|
| |