Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1173 |
Symbol | |
ID | 5752900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1389734 |
End bp | 1390420 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641287443 |
Product | SapC family protein |
Protein accession | YP_001553609 |
Protein GI | 160874293 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.282711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.903795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACAC ATTATGTCCC TTTGAATAAT TCTATTCATA GACACTTAAA AGTAAACAAT ATTGTTGACT ATAAAGTTTT TGAAAACATG CACATGTTGC CTCTTCAGGT TCAAGAGTTC ATGTCAGCAG CGACTAGTTT TCCCATTATA TTTACCAAAA ATGCTCAAAC AGGTGAATTC TTACCTGTAG CTATTACATC TTTAAAAGAA AACTCGAACA AATTAATGAT AAATGGTAGA TGGATATCGC GTTATTTACC TATTCAAGTT CAATTGTATC CTTTCGGTGC GAGCTATACT GATAATAAAA TAATTATTGG AATTGATCTA AATAATTCGT CGGTGTCCGA AATCGGTGAT AATTCTTTGT TTACAACTGA TGGCGATAAC ACCGCGTATC TCAATACACA ACTAGAGTTA GCTAGTCTTC AGGCTAATTA TCAGGAAATG ACAAGAAATT TTATTAGTAT TTTAATACAG CATGATCTAT TACAGCCTAG AACATTAACT GTAAATGCTC AGGATGGAAC TAAGACTAAT ATTAATGGTA TTTATACCGT TGATGAACAA AAAATGCATG AGCTAGAAGA AGTAGTCATG TTAGATTTTG CAAAACGTGG ATTCTACTCT GTGATTTATG CGCATCTTTG TTCTCTTAGT TTAATTGATT TAGTCATGGA AAAATAA
|
Protein sequence | MTTHYVPLNN SIHRHLKVNN IVDYKVFENM HMLPLQVQEF MSAATSFPII FTKNAQTGEF LPVAITSLKE NSNKLMINGR WISRYLPIQV QLYPFGASYT DNKIIIGIDL NNSSVSEIGD NSLFTTDGDN TAYLNTQLEL ASLQANYQEM TRNFISILIQ HDLLQPRTLT VNAQDGTKTN INGIYTVDEQ KMHELEEVVM LDFAKRGFYS VIYAHLCSLS LIDLVMEK
|
| |