| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1160 |
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| Symbol | |
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| ID | 5752887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 1374349 |
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| End bp | 1374936 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641287430 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_001553596 |
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| Protein GI | 160874280 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.574429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA AGCTTGTCAA AAATATGGCT AAATTCGAAC GATTGACACA AAAGGACTTT
CAACGAGGTT TCTCATTAAT TGAGGTGCTT GTTGCATTGG TGATCTTAGT CATTGGCTTA
ATCGGTATTT TTAATCTACA TATCGTTGCA AAGCGTGGCA GCTTCGAGTC ATTTCAGCAA
ACCCAAGCCT CCTATTATGC AAACGATATT ATCAACCGGA TGAAGCTGAA TAGAACACAA
CTGGTCAATT ACGATGGTGA GTACACAGGT TCTCTGGGTA AACCCAGTAG TGTTTGTGAT
GTTGCAGTTG GAGCCGTGAA TATATGTACT CCAGAAGAAA CAGAAGCTTG GGACCTATAT
CAGTGGGAGC AGAGTTTTAT GGGGGCAACT GAAGTTGTGG ATAGCCAGAA TGTTGGGGGA
TTAGATTCGC CAACGGCTTG TATTAGTGTA AATGGTTCAA CTGTGACAGT TGCTGTTGCG
TGGAGAGGGG TCCGAGAAGG CGCGGGAACA AGCTATTCAG GCAGTGAATG CGGAAAAGAT
ATTGGTAAAC GTAGACGGCT TTTTATTCTT TCGACAGTGA TTATTTAG
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| Protein sequence | MAEKLVKNMA KFERLTQKDF QRGFSLIEVL VALVILVIGL IGIFNLHIVA KRGSFESFQQ
TQASYYANDI INRMKLNRTQ LVNYDGEYTG SLGKPSSVCD VAVGAVNICT PEETEAWDLY
QWEQSFMGAT EVVDSQNVGG LDSPTACISV NGSTVTVAVA WRGVREGAGT SYSGSECGKD
IGKRRRLFIL STVII
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