Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1145 |
Symbol | |
ID | 5752872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1356652 |
End bp | 1357608 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287415 |
Product | transaldolase B |
Protein accession | YP_001553581 |
Protein GI | 160874265 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000154463 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.579932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATA CATTAGAGCA ACTCAAGTTA TATACCACTA TCGTCGCTGA CACAGGCGAC ATCGAAGCGA TTAAACGCTA CCAACCTGAA GATGCGACAA CCAATCCATC GCTCATCTTG AAAGCGGCTC AAATTCCTGA ATACGAATCC CTCATTGATA ACGCTATCGA CTGGGCAAAA TCACAAAGTG ACGATCTCGC GCAGCAACTT GATGATGCCA GCGACAAGCT CGCCGTTAAT ATCGGTGTAG AAATACTGAA ACTCGTTCCT GGTCGTATCT CTACTGAAGT CGATGCCCGT TTATCATTCG ATAAAGAACA ATCAATCGCT AAAGCCCATA AGCTGGTTCG CCTCTACAAA GAAGCGGGCG TTGATAAGTC ACGTATTCTG ATCAAACTCG CTTCAACTTG GGAAGGCATT TGTGCAGCTA GAGAGCTGGA GAAAGAAGGC ATCAACTGTA ACTTAACCCT ACTATTTAGC TTTGCCCAAG CACGTGCTTG TGCCGAAGCG GGTGCTTATC TGATTTCGCC TTTTGTTGGC CGCATTCTTG ATTGGTACAA AAAAGATACA GGTAAAGACT ACGATGCCGT AAATGACCCA GGTGTCATTT CTGTTACCGA AATCTATAAT TATTACAAAC AGCATGGTTT TAATACTGTC GTTATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AACTAGCAGG CTGCGATCGT CTCACAATTG GCCCTTCTCT GTTAGAAGAA CTGGCTAATT CGCAAGTCGA CATTACCCCT AAACTGGTTG CAGCAACCAG CACTGTTGCT GCCGAAGCCC CATTGACAGA AGCGCAATTC CGTTGGGACT TTAACCAAGA TCCAATGGCT GTAGATAAGC TTGCGGAAGG TATTCGAAAC TTTGCCATAG ACCAAGGCAA ACTCGAAGTG ATGCTCACGG CTAAGCTCGC AAACTAA
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Protein sequence | MANTLEQLKL YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYES LIDNAIDWAK SQSDDLAQQL DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEQSIA KAHKLVRLYK EAGVDKSRIL IKLASTWEGI CAARELEKEG INCNLTLLFS FAQARACAEA GAYLISPFVG RILDWYKKDT GKDYDAVNDP GVISVTEIYN YYKQHGFNTV VMGASFRNIG EIIELAGCDR LTIGPSLLEE LANSQVDITP KLVAATSTVA AEAPLTEAQF RWDFNQDPMA VDKLAEGIRN FAIDQGKLEV MLTAKLAN
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