Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1121 |
Symbol | |
ID | 5752845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1321347 |
End bp | 1323920 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287388 |
Product | ATPase AAA-2 domain protein |
Protein accession | YP_001553557 |
Protein GI | 160874241 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0611865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.087173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTT CAGCTTGCCA TCTCAGATGC CCAGTCTCTC GCACTTGGGC GTGATCATCA GTTTATTGAA CCGCTGCATT TGATGATGGC ATTGTTGAAC CAAGATTCAG GTTCAATCCA TCCCTTATTG ACCCAAGCTG GCATTCGCGT GAGTGCGCTG CGCTCGCTTT TGAGTCAAGA GCTGGAACGC TTACCTCAAG TCGAAGGTAC GGGCGGCGAT GTGCAATTAT CCCAAGGTTT AATACGTTTA TTAAATCTGT GCGATAAATT GGCGCAAAAG CGTAAAGACA AATATATCTC TAGCGAGTTA TTTGTATTAG CTGCGTTAGA AGGAGGCGAT GCCCTCGCGC AAGCGTTGAA AAAAGCCGGC GCGACTAAAG AGTTGATGGA GCAAACCATT GAACAAATGC GCGGCGGCCA AAAAGTGGAT GATCCGAACG CTGAAGATCA ACGTCAAGCG TTGAAGAAAT TTACTATCGA TCTGACCGAG CGAGCCGAAC AAGGCAAGTT AGATCCTGTG ATCGGCCGTG ACGATGAAAT TCGCCGCACG ATCCAAGTAT TACAACGTCG CAGTAAAAAC AACCCCGTCC TTATCGGTGA ACCGGGTGTG GGTAAAACTG CAATTGTTGA AGGACTTGCC CAACGTATCG TTAATGGTGA AGTCCCCGAG GGGATTAAAA ATAAGCGCGT TTTATCCCTC GACATGGGCT CATTGATTGC GGGCGCTAAA TATCGCGGTG AGTTCGAAGA ACGTTTAAAA GCGGTATTGA ATGAGTTAGC GCAGGAAGAA GGTCAAGTGA TCCTCTTCAT CGACGAGCTG CATACTATGG TCGGCGCCGG TAAAGGTGAA GGCGCAATGG ATGCGGGTAA CATGCTGAAA CCTGCGTTAG CGCGTGGTGA TTTGCACTGT GTGGGCGCTA CCACGCTTGA TGAGTATCGT CAGTACATTG AAAAAGATGC GGCGCTTGAA CGTCGTTTCC AAAAAGTGCT GGTGGATGAG CCAAGTGTTG AAGACACCAT CGCCATTTTG CGTGGCCTGA AAGAACGTTA CGAGCTGCAT CACCATGTGG AAATTACCGA TCCGGCGATT GTGGCGGCGG CGACTATGTC GCACCGTTAT GTGTCGGACC GTAAGTTGCC CGATAAAGCG ATCGATTTGA TCGACGAAGC GGCATCGAGC ATTCGCATGC AGATGGACTC AAAACCTGAG TCACTCGACC GGCTCGAACG TCGTGCTATC CAGCTCAAAC TGGAGGAGCA AGCCTTAGCC AAAGAAAATG ATGAGGCGAG CCGTCGCAGG CTTGACCATC TGCAAGAGGA ATTACGAGAC GTTGAAGCTA AAGCTTCAGA GTTGAACGAA ATCTGGCGTA CTGAAAAAGC CGCACTAGCG GGAACTCAGC ACATTAAAGC CGATCTCGAA CAGGCTCGAA TGGACTTAGA AGTGGCGCGT CGTGCGGGTG ATTTAACTCG GATGTCTGAG CTGCAATACG GTCGTATTCC TGAGCTTGAA AAACAGCTCG ATTTGGCATC GCAAGCCGAA ATGCAGGACA TGACGTTATT GCGTAACAAG GTCACTGAGT TCGAAATCGC CGAAGTCTTG TCGAAAGCGA CGGGAATTCC CGTATCGAAA ATGCTTGAAG GCGAGCGCGA AAAATTACTG CAAATGGAAG TGGCGCTGCA CGAGCGGGTG ATAGGCCAAA ACGAAGCCGT TGATGCGGTC GCGAATGCGA TTCGTCGTAG CCGCGCGGGT CTAGCGGATC CAAATCGCCC GATTGGCTCG TTCTTGTTCT TAGGCCCAAC CGGTGTGGGT AAAACTGAGC TATGTAAATC ACTGGCGAGG TTCTTATTCG ATACCGAATC GGCCTTAGTG CGCATTGATA TGTCTGAGTT TATGGAGAAA CACTCAGTAT CGCGTTTAGT GGGTGCGCCT CCTGGATACG TAGGTTATGA AGAGGGCGGT TACTTAACGG AAGCCGTTCG TCGTAAACCG TATTCGGTGA TATTGCTCGA CGAAGTCGAG AAAGCGCATC CCGATGTGTT TAACATCTTA CTGCAAGTGC TGGATGATGG ACGCTTAACC GATGGTCAAG GTCGTACTGT AGATTTTAGA AATACAGTGA TCATCATGAC CTCGAACTTA GGCTCCGACA TTATCCAAGA AGGATTTGGT CAAGTGACCT ATGCAGAGAT GAAAGCGGCG GTAATGAATG TGGTCACTCA CAGTTTCAGA CCCGAGTTTT TAAACCGTAT CGATGAATCT GTGGTGTTCC ATCCATTGGA TGCTGCCAAT ATCAAGCGTA TTGCTTCGAT ACAGATTGCT TCCTTACGCC AACGTTTGGC GGAGAAGGAC TATACATTGG AGATCACCGA CGACGCATTA TCATTGATTG CGGAAATTGG TTTCGATCCT GTGTATGGCG CAAGACCGTT GAAACGGGCA TTGCAGCAAG AAGTCGAAAA CCCGCTGGCG CAGAAATTAC TGCGTGGCGA CTTGTTACCG GGTAAACCGA TCAAGGTCAG CTGTGCGGGT GGCGAGTTAG TGTTCGAGCA ATAA
|
Protein sequence | MRLDRMTNKF QLAISDAQSL ALGRDHQFIE PLHLMMALLN QDSGSIHPLL TQAGIRVSAL RSLLSQELER LPQVEGTGGD VQLSQGLIRL LNLCDKLAQK RKDKYISSEL FVLAALEGGD ALAQALKKAG ATKELMEQTI EQMRGGQKVD DPNAEDQRQA LKKFTIDLTE RAEQGKLDPV IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL DMGSLIAGAK YRGEFEERLK AVLNELAQEE GQVILFIDEL HTMVGAGKGE GAMDAGNMLK PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSVEDTIAIL RGLKERYELH HHVEITDPAI VAAATMSHRY VSDRKLPDKA IDLIDEAASS IRMQMDSKPE SLDRLERRAI QLKLEEQALA KENDEASRRR LDHLQEELRD VEAKASELNE IWRTEKAALA GTQHIKADLE QARMDLEVAR RAGDLTRMSE LQYGRIPELE KQLDLASQAE MQDMTLLRNK VTEFEIAEVL SKATGIPVSK MLEGEREKLL QMEVALHERV IGQNEAVDAV ANAIRRSRAG LADPNRPIGS FLFLGPTGVG KTELCKSLAR FLFDTESALV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL GSDIIQEGFG QVTYAEMKAA VMNVVTHSFR PEFLNRIDES VVFHPLDAAN IKRIASIQIA SLRQRLAEKD YTLEITDDAL SLIAEIGFDP VYGARPLKRA LQQEVENPLA QKLLRGDLLP GKPIKVSCAG GELVFEQ
|
| |