Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1057 |
Symbol | |
ID | 5752778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1252014 |
End bp | 1253948 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641287321 |
Product | lipid ABC transporter ATPase/inner membrane protein |
Protein accession | YP_001553493 |
Protein GI | 160874177 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.681718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTC CCTACCCGAA GGATATCCCT GTGACCGAGC CGACCGTCGA ATTAGCCAAA TCACCAAACT CCATTAAAGC GGGCGCAGAG CCATTGCCTG AAAAGTTAAT TCCAGTCACG CCTACAATAA GCGCTGATGC TTCGAAGGTT AAACCAACCT CAGCGCAGCA AAGATCCGTA TTGCCTTGGA TTATGGGTTT TCTTAAACCC TACAAACTGA AAGTCGTCGC GGCGATTATC TGCTTGATGA TAGGGTCACT CGCTTGGCTA TCATTGGGCC AAGGTGTGCG CTTAATGGTT GATGAAGGCT TTGTGCGCGA CAATGCGCAG CGGCTGAATG AAATCATACT GTTAGTGCTT GGGATTACCG CCGTCAGTGG CACAGCGGTG TTTTGCCGCT TCTATTTAAT GACTTGGCTC GGCGAGCGGG TCAGTGCCGA TATTCGTCTA ACTGTTTACA ATCAACTGCT TAAACTTTCG CCCGCCTTTT ACGCTAAGGT TCGCACCGGC GAAGTGATCT CCCGTTTTAC CGCCGACTCT ACCTTGCTGC AAACCGTGGT GGGCTCGAGT TTATCTATGG CATTGCGCTC AAGTGTGACG GTACTTGGTG GTTTAGTCAT GATGGGCATC ACCAGCGTTA AGATGACATT GCTGGTGTTG TTGGCCGTAC CTTTAGTGTT GGGACCGGTG ATTTTTTTCG GTCGTAAAGT GCGTACGCTG GCGCGAGAAA GCCAAGACAG GGTTGCCGAT CTCGGCGCTT ATGTGGATGA AACACTTCAT GAAATTCATA CGGTACAAGC CTATGGTCAT GAAGATAAAG ACCGTAGCTT ATTCAATACC CGCGTCGAAG ATGTGATGTC TGCGGCAAGC GGCCGCATTC GTTACCGTGC CTTGTTGATC TCAACCGTGA TGTTTTTAAG TATCGCGGCG ATTGCTATGG TGACTTGGGT CGGTGCCCAC GATGTCATGT CGGGTAAGAT GACGGGTGGC GAGCTATCCG CCTTTATGTT TTATGCTGTG ATGGTTGCAG GCGCAGTGGC GACCATTAGC GAAGTAATCG GCGAAATTCA GCGGGCTTCT GGCGCCGCCG AACGTTTAAT CGAACTGGCT GAAACGCCAG TGGATATTCC CGTTGCAACT CATCCAGTAG CGTTACCCGC CAAGGTCTGT GGCGAGTTAG TGATAGAAGG ACTCAACTTT GCCTATCCAG AGCATGATGC CTTAGTGCTA AAACAGCTCA ATATGGCCAT TGCCGCGGGT GAGCGGGTCG CCTTAGTCGG CCCAAGTGGC GCGGGTAAGA GTACCTTGTT CCAGTTATTG CAGCGCTTTT ATGTGCCTAG CGCTGGCAGT ATTCGACTGG AAGGAATTGA TATTGCTAAG CTTCTGCCAC ATGACCTACG GGCGCAGTTT GCTCTGGTGC CGCAGGACTC AGTGATTTTT GCGACCAGCG TACTTGAAAA CGTGCGTTAT GGCCGAGTCG ATGCGACTGA GCAAGAAGTG ATCGATGCTT GTATCGCGGC CCGTGCCCAC GAGTTTATTA GCGAGTTTAC TGACGGTTAT CAAACCTATT TAGGCGAGCG TGGCGTGCGA CTTTCTGGTG GGCAAAAACA GCGGATCGCC ATTGCGCGGG CGATTTTAGC CGACAGACCC ATATTGTTAC TCGATGAAGC GACCAGCGCC TTAGATGCGG TAAGCGAGCA GAAAGTGAAG CAAGCGTTGG ACGTATTGAT GGCGGGTAAA ACCACCTTAA TTATTGCCCA TCGCTTATCG ACGGTGATCA ATGCCGATAG GATTTTTGTA TTCGATAAGG GCGAGATTGT TGCCTGCGGT CGCCACCAAG AGTTAATGCA ATCCAATGCG TTATATCGTG AATTTGCCAG TCTGCAATTG TTAACCGAAG AGGCTAATGC CAGCGCCTTG AATGAGACCA TTTAG
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Protein sequence | MAVPYPKDIP VTEPTVELAK SPNSIKAGAE PLPEKLIPVT PTISADASKV KPTSAQQRSV LPWIMGFLKP YKLKVVAAII CLMIGSLAWL SLGQGVRLMV DEGFVRDNAQ RLNEIILLVL GITAVSGTAV FCRFYLMTWL GERVSADIRL TVYNQLLKLS PAFYAKVRTG EVISRFTADS TLLQTVVGSS LSMALRSSVT VLGGLVMMGI TSVKMTLLVL LAVPLVLGPV IFFGRKVRTL ARESQDRVAD LGAYVDETLH EIHTVQAYGH EDKDRSLFNT RVEDVMSAAS GRIRYRALLI STVMFLSIAA IAMVTWVGAH DVMSGKMTGG ELSAFMFYAV MVAGAVATIS EVIGEIQRAS GAAERLIELA ETPVDIPVAT HPVALPAKVC GELVIEGLNF AYPEHDALVL KQLNMAIAAG ERVALVGPSG AGKSTLFQLL QRFYVPSAGS IRLEGIDIAK LLPHDLRAQF ALVPQDSVIF ATSVLENVRY GRVDATEQEV IDACIAARAH EFISEFTDGY QTYLGERGVR LSGGQKQRIA IARAILADRP ILLLDEATSA LDAVSEQKVK QALDVLMAGK TTLIIAHRLS TVINADRIFV FDKGEIVACG RHQELMQSNA LYREFASLQL LTEEANASAL NETI
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