| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0915 |
|---|
| Symbol | |
|---|
| ID | 5752636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1080637 |
|---|
| End bp | 1081188 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641287179 |
|---|
| Product | SH3 type 3 domain-containing protein |
|---|
| Protein accession | YP_001553351 |
|---|
| Protein GI | 160874035 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3103] SH3 domain protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000529775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTGC TGTCTTCCAA CCTGCTGGCC GAAGGCCAAT CCCGTTACAT TTCGGATAAC
GTGTTCCTTT ATCTTTTAGG TGGTCCTGGT ACTGAGTTCC GAATTCTTGG CTCAATTGAA
GCCGGTCAAC CTGTGACACT GCTCAACGAA ACCCAAGGTG ATTACTCTAA AATCATCGAC
CATAAAGGCC GCGAAGGTTG GGTGCAAACT AACCTAATCA GCTCGACTCA AAGTTTCCGT
GAACAAGTGC CAGCGTTAAC CACTGAGCTT GCACAAGCTA AAGCTAAACT AGCGGAAGTA
TTAAGTTCCA CTGATAACCA CGCCGACGAA GTGACCGAAC TGAAGGCTAA ACTAAGCGAG
TTAGAAACAA ACCTAGCCAA AACCACTCAA GAACGTGATG AGCTTAAAGT CGCGGTTGAT
CGCTCAGCCC AAGATGAACG TTTTGAACTA TGGCGCCAAG GCGGATTAAT TGCAGGTATG
GGGTTAATCC TAGGCATTAT TTTAGTGTAT TTACCTAGAC CACAACGTCG CAGTAAAAAA
CGTTGGATGT AA
|
|---|
| Protein sequence | MMLLSSNLLA EGQSRYISDN VFLYLLGGPG TEFRILGSIE AGQPVTLLNE TQGDYSKIID
HKGREGWVQT NLISSTQSFR EQVPALTTEL AQAKAKLAEV LSSTDNHADE VTELKAKLSE
LETNLAKTTQ ERDELKVAVD RSAQDERFEL WRQGGLIAGM GLILGIILVY LPRPQRRSKK
RWM
|
|---|
| |