| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0913 |
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| Symbol | |
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| ID | 5752634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1076919 |
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| End bp | 1080113 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641287178 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001553350 |
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| Protein GI | 160874034 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00674805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA TAACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC
AATCTCGACG AACTGTTCAA AGCGATCAGC GACAACTACA TTGTCGATGA AGAACAATAC
TTGTCAGAGT TGATCCAACT AGTTCCCTCC AGTGATGAAG CCATAGCGCG CGTCACTCGT
CGTGCCCACG AACTGGTTAA CAAGGTTCGT CAATTCGATA AAAAAGGTTT GATGGTTGGC
ATAGATGCCT TCCTGCAACA GTACAGCTTA GAAACACAGG AAGGCATTAT CCTGATGTGT
TTAGCCGAAG CGCTACTGCG TATTCCCGAT GCGGCCACTG CCGATGCACT GATTGAAGAT
AAGCTTTCAG GCGCTAAGTG GGATGAGCAC ATGAGTAAGA GTGACTCTGT ACTCGTTAAC
GCATCGACCT GGGGCCTTAT GCTCACGGGT AAAATTGTTA AGCTCGATAA AAAAATCGAT
GGCACCCCAA GCAACTTACT GAGCCGCTTA GTTAATCGTC TCGGCGAGCC AGTGATCCGC
CAAGCCATGA TGGCCGCGAT GAAGATCATG GGTAAGCAGT TCGTGCTGGG CCGCAACATG
AAAGAAGCCC TGAAGAACAG CGAAGACAAG CGTAAGTTAG GCTATACCCA TTCCTACGAC
ATGCTGGGCG AAGCGGCGTT AACGCGTAAA GATGCTGAGA AATACTATAC CGATTACGCC
AATGCGATCA CTGAGCTCGG TGCTCAAAGC TATAACGAAA ATGAATCACC GCGCCCAACG
ATTTCAATCA AGCTATCGGC ATTGCACCCA CGTTACGAAG TGGCCAATGA AGACCGCGTT
TTAACTGAAC TGTACGACAC AGTTATCCGC CTGATTACAC TGGCTCGCGG CTTAAATATC
GGTATTTCTA TCGATGCTGA AGAAGTCGAT CGCCTCGAGT TGTCACTGAA ACTGTTCCAA
AAACTGTTTA ATTCAGAAGC GGCAAAAGGC TGGGGATTAC TCGGCATTGT GGTTCAAGCT
TACTCTAAGC GTGCCCTGCC CGTCCTGGTT TGGTTAACTC GTCTTGCCAA AGAGCAAGGG
GATGAAATCC CCTTACGTCT GGTAAAAGGC GCCTATTGGG ATAGCGAACT GAAATGGGCC
CAACAAGCTG GCGAAGCCGC TTACCCACTT TACACTCGCA AAGCCGGTAC TGACGTTTCT
TACCTCGCCT GCGCCCGCTA CTTGTTATCG GATGCGACTC GCGGCGCTAT CTACCCACAG
TTTGCTAGCC ACAATGCGCA AACCGTTGCG GCGATTTCAG ATATGGCGGG CGATCGTCAC
CATGAGTTCC AACGCTTACA CGGCATGGGA CAAGAGCTAT ACGACACGAT TTTGTCGGAA
GCTGGCGCCA AATCGGTACG TATTTATGCG CCCATTGGTG CCCATAAGGA TCTACTGCCC
TACTTAGTGC GTCGTCTGCT GGAAAACGGG GCCAACACTT CGTTCGTCCA CAAGCTCGTT
GATCCTAAAA CCCCAATCGA CTCATTAGTA ATTCACCCGC TAAAAACGCT GACGGGCTAT
AAAACCCTGG CTAACAATAG AATCGTTTTA CCTGCCGATA TTTTCGGTAG TGATCGCAAA
AATTCCAAGG GACTCAATAT GAACATCATT TCCGAATCTG AGCCATTTTT CGCGGCAATA
GAACAGTTTA AAAATACCCA ATGGCAAGCA GGCCCTCTGG TTAACGGCAA AACCTTAACC
GGTGAGCACA AAACCATCGT CAGCCCATAC GACACCACCC AAACAGTGGG TCAAGTAGCC
TTTGCCGATG ATGCGGCCAT AGAACAAGCA CTCGCGTCTG CTGAAGCGGC GTTTGCTTCA
TGGGCACGTA CGCCAGTTGA AACCCGTGCT TCTGCGCTGC AAAAGTTGGC GGATTTATTA
GAAGAAAACC GCGAAGAATT GATCGCCTTG TGTACCCGTG AAGCGGGTAA GAGCATTCAA
GACGGTATCG ACGAAGTCCG TGAAGCCGTT GATTTCTGTC GTTACTACGC AGTACAAGCC
AAGAAAATGA TGGCTAAGCC TGAACTGCTT CCTGGCCCAA CGGGAGAGCT GAACGAACTG
TTCCTCCAAG GCCGCGGCGT ATTCGTGTGT ATCAGCCCGT GGAACTTCCC ATTGGCTATC
TTCCTCGGCC AAGTGTCTGC GGCATTAGCG GCGGGTAACA CAGTGATTGC GAAACCTGCG
GAGCAAACCT CGATTATTGG TTACCGTGCA GTGCAACTTG CTCACCAAGC AGGTATTCCT
GTTGAGGTTC TGCAATTCCT ACCAGGTACG GGTGCGACTG TCGGTAGCGC AATTACAGCC
GATGAACGTA TCGGCGGCGT ATGCTTTACC GGTTCAACTG GCACAGCAAA ACTGATTAAC
CGTACACTGG CTAACCGTGA TGGCGCGATT ATTCCATTAA TCGCCGAAAC TGGCGGTCAA
AATGCCATGG TGGTGGACTC AACCTCACAA CCTGAGCAAG TGGTTAACGA TGTGGTTTCA
TCGTCATTCA CCAGCGCAGG TCAACGTTGC TCGGCGCTGC GTGTACTCTT CCTCCAAGAA
GACATTGCCG ATCGCGTGAT CGAAGTGCTG CAAGGCGCGA TGGATGAGTT AGTGATTGGC
AACCCAAGTT CAGTGAAAAC CGACGTAGGC CCAGTGATTG ATGCTACCGC AAAAGCCAAC
TTAGATGCGC ACATCGACCA CATCAAGCAA GTCGGTAAGC TTATCAAGCA AATGCCGCTG
CCTGCAGGCA CTGAGAACGG TCACTTCGTT TCACCCACTG CGGTTGAAAT TGATTCGATT
AAAGTGCTTG AGAAAGAACA CTTTGGCCCA ATCCTGCACA TTATTCGCTA CAAGGCAGCA
GAGCTAAGCC AAGTGATCAA CGAGATCAAC AGCACAGGCT TTGGCTTAAC CTTAGGTATC
CACAGCCGTA ACGAAGGCCA TGCCCTTGAA GTTGCAGATA AAGTGAATGT GGGTAACGTC
TACATTAACC GCAACCAAAT CGGCGCTGTG GTTGGCGTAC AGCCTTTCGG CGGTCAAGGC
CTGTCAGGCA CTGGCCCTAA AGCCGGTGGC CCACACTACT TAACCCGTTT TGTGACTGAA
AAGACTCGCA CTAACAACAT CACCGCCATC GGTGGTAATG CAACGTTATT GTCACTGGGT
GATGGCGAAG AATAA
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| Protein sequence | MEAITMFKAS EVLAGRYDSA NLDELFKAIS DNYIVDEEQY LSELIQLVPS SDEAIARVTR
RAHELVNKVR QFDKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED
KLSGAKWDEH MSKSDSVLVN ASTWGLMLTG KIVKLDKKID GTPSNLLSRL VNRLGEPVIR
QAMMAAMKIM GKQFVLGRNM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DAEKYYTDYA
NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LITLARGLNI
GISIDAEEVD RLELSLKLFQ KLFNSEAAKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG
DEIPLRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ
FASHNAQTVA AISDMAGDRH HEFQRLHGMG QELYDTILSE AGAKSVRIYA PIGAHKDLLP
YLVRRLLENG ANTSFVHKLV DPKTPIDSLV IHPLKTLTGY KTLANNRIVL PADIFGSDRK
NSKGLNMNII SESEPFFAAI EQFKNTQWQA GPLVNGKTLT GEHKTIVSPY DTTQTVGQVA
FADDAAIEQA LASAEAAFAS WARTPVETRA SALQKLADLL EENREELIAL CTREAGKSIQ
DGIDEVREAV DFCRYYAVQA KKMMAKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI
FLGQVSAALA AGNTVIAKPA EQTSIIGYRA VQLAHQAGIP VEVLQFLPGT GATVGSAITA
DERIGGVCFT GSTGTAKLIN RTLANRDGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS
SSFTSAGQRC SALRVLFLQE DIADRVIEVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN
LDAHIDHIKQ VGKLIKQMPL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHIIRYKAA
ELSQVINEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG
LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DGEE
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