Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0875 |
Symbol | |
ID | 5752596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1036547 |
End bp | 1037212 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287140 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001553312 |
Protein GI | 160873996 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCACAA TTAATGAATT AGTTTTTTTA CATCAAATGG CGGCACCATG TCATTTAGCG TTACTCGCTG AATCCATAGG CTTGAAAACT CGTATCGTTA AGCATGCGGC GGAATTAGAT TTAGATAAGA GTCGTCGAAG TTTTTATCTG ATCACCCAAA AAGGCGCTGC ACTCGATAAC AAGGGGATCC CTTTACTGGC TTCGCGCTTA GTGTCACATT TTCCCGTGGC GCTATACCAA GTTGAGCGTG ACTCTTTAGA TCAAGAGTCG GCTATGTTAC TCGGTATTCG TGGTTTGTTG TTTGCCGATC AACGTTTGGA TTTGATGTTG ACGGGTTTGC GTAAAATGGT GGCAGAGGAG TTGTGGTACG ACAGAACATT ACTGAGTAAA GTGTTCCGTC GTGTAGTACA AAAGCTCGAT GGCAATAATG AGATGCTCTC CGATACAGTG GCTATGCTAC AGATGCTGAC TTCCCGTGAG CGCACTATTA TTCAATTTGT GTCGAGTGGC GCGAGGAATA AAGAAATCGC TCACAGATTG TGCATCAGCG AACATACGGT GAAAGCTCAT ATTTCCTCTA TCTTCCGTAA AACCCAGTCC CGTAATCGTG TTGAGTTGTT GCGTTGGGCA CAAACCTATC AGACCCACTT CGAGCTGTGT AGCTAG
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Protein sequence | MSTINELVFL HQMAAPCHLA LLAESIGLKT RIVKHAAELD LDKSRRSFYL ITQKGAALDN KGIPLLASRL VSHFPVALYQ VERDSLDQES AMLLGIRGLL FADQRLDLML TGLRKMVAEE LWYDRTLLSK VFRRVVQKLD GNNEMLSDTV AMLQMLTSRE RTIIQFVSSG ARNKEIAHRL CISEHTVKAH ISSIFRKTQS RNRVELLRWA QTYQTHFELC S
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