| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0703 |
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| Symbol | |
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| ID | 5752420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 854990 |
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| End bp | 856930 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641286965 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001553141 |
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| Protein GI | 160873825 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.879487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATACA ATTTCGCCAT TAATCAGTCT CAAAAAGATC GTTTATTCGC CGACATTGCT
ATCGACACAG ACAAAATCGT TGTTCCCCAA GTAATGGTTG ATAACTGGCA ACAAACCTTA
GATTTGCTCT CTGAATTGGT CGACACTCCC GCGGCTTTAA TCATGCGTGT CCATCAAACC
GATATAGAAG TTTTTACCTC GAGCCGCACT CAAGGGAATC CCTATAAAAA ACACGACAAA
GACAGTTTAG GCCACGGACT TTACTGCGAG ACAGTGATAA AAGGAGGCAA GGAACTCCAC
ATTCCGAATG CCCTAAAAGA TAAAGACTGG GATAAAAATC CGGATATAAA ACTCGGCATG
ATTGCATACT GTGGCTTACC TTTACGCTGG CCCGATAACA GCGCCTTTGG CACTATCTGC
ATGCTCGATA ACAAAGAGCA TAATTACAGC CAATCGTTTC GCAGCTTACT CGCTCGTTTT
CAAAATGGTA TAGAAGCCAA CCTCGTCACC CTCTATCAAC AGGCAAAGCT GCAACTGCAC
AACCAAGAGT TAGAGCAAAA AGTGCAACAA CGCACCCATG AACTCGCCGA ACTCAGTAGC
AAACTCATCA AAGAAATCGA AAATCGAACC TCCACCGAAA CCTCATTGGA ATACCACAAA
AGCTATGATC CACTGACGGG ATTACCGAAT CGCATCAATT TGATTAATAG CCTTTCGACC
ATGCTCGAAG AAGTGAATCG CAAGGAAAAG ATTTCAGTAC TCTATCTGGG GCTGCGTAAT
TTCAAGTCCA TCAACGACAG TTATGGCTAC CTGATTGGCG ATAAAATTCT CACCATTCTC
AGCCAACGTT TACAACACTA TGCCGATGAA AATACCTTCA TCGCCCGTAT TGCCGGCGCC
GAGTTTGTGA TTATTCAAGC CCATAAACCT TCGAACAACG AAACCAACAA ACTCATCAAT
AAAGTGCTTA GCTGCTGCAA TACCCCCTTT GGCGTGGCGG ATTTTGTGAT CACCATTCCA
TCGAGCATGG GTATAGCTCA AGCGCCCATC GATGGCATAG ATGCCGCCAT TCTGCTGCAA
AAAGCAGGGG CTGCGATGAC GATCAGCAAA GCCGATGGCT CAACTCACAG CTTCTTTAAT
CAAGATACTC AAGCGGCTTT GAATCTACGC TATCAACTGG AATCTCACTT AGTCGATGCA
TTGAACAAAA ACGAGTTAAG CCTTCATTAC CAACCCTTTA TTAACTTAAG GACTCAAAAG
GTGATAGGCG CCGAAGCCCT GCTGCGCTGG CACAATCCGA TCCTTGGCAA TGTCGCCCCA
GACAGATTTA TCGCCTTAGC AGAACGTAAT GGCCAGATTA TAGATATTGG CAATTTTGTA
TTGCATACCG CCCTAGCTCA GGCGGCAAAA TGGTGTCGTG AGCTAGATCA GGAGTTTAAA
ATCGCCATCA ATATCTCCCC TTTGCAAATG CGCAATCCCC GTTTTAGCGA GCACATAGCT
GACTTACTCA CCCTCTATCA ATTGCCACCG ACCGCCCTAG AGCTTGAAAT CACCGAAGGC
ATGTTGATGC AGGACGAGCA CATTGCCCAC AATGCCATCC AAAAGCTGCA GGAACTCGGG
ATCCGCATCT CCTTAGATGA CTTTGGTACT GGCTATTCAT CCCTAAGTTA TCTACAAAAA
TACTCTTTCG ATACTTTAAA AATCGATCGC TGTTTTATCA ATAAACTCGA AGAAAACGAA
CAAGATAGGG AGCTCACTAA AGCGATTATT GCCATAGGCA AGAAACTGAA CTTAGTCGTG
ATCGCCGAAG GCGTGGAAAC CCTAGAACAA GATGCCTTTA TTCGTCACGA GGAATGCGAC
TTAGGTCAAG GCTACCTCTA CGGTAAACCC ATCACCGCAA CACAGTTTGA GCAGGCATTT
ATCCATAAAA AAGAGCATTA A
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| Protein sequence | MPYNFAINQS QKDRLFADIA IDTDKIVVPQ VMVDNWQQTL DLLSELVDTP AALIMRVHQT
DIEVFTSSRT QGNPYKKHDK DSLGHGLYCE TVIKGGKELH IPNALKDKDW DKNPDIKLGM
IAYCGLPLRW PDNSAFGTIC MLDNKEHNYS QSFRSLLARF QNGIEANLVT LYQQAKLQLH
NQELEQKVQQ RTHELAELSS KLIKEIENRT STETSLEYHK SYDPLTGLPN RINLINSLST
MLEEVNRKEK ISVLYLGLRN FKSINDSYGY LIGDKILTIL SQRLQHYADE NTFIARIAGA
EFVIIQAHKP SNNETNKLIN KVLSCCNTPF GVADFVITIP SSMGIAQAPI DGIDAAILLQ
KAGAAMTISK ADGSTHSFFN QDTQAALNLR YQLESHLVDA LNKNELSLHY QPFINLRTQK
VIGAEALLRW HNPILGNVAP DRFIALAERN GQIIDIGNFV LHTALAQAAK WCRELDQEFK
IAINISPLQM RNPRFSEHIA DLLTLYQLPP TALELEITEG MLMQDEHIAH NAIQKLQELG
IRISLDDFGT GYSSLSYLQK YSFDTLKIDR CFINKLEENE QDRELTKAII AIGKKLNLVV
IAEGVETLEQ DAFIRHEECD LGQGYLYGKP ITATQFEQAF IHKKEH
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