Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0670 |
Symbol | |
ID | 5752387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 816994 |
End bp | 818361 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286932 |
Product | MATE efflux family protein |
Protein accession | YP_001553108 |
Protein GI | 160873792 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.358402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACA GACACGGGCT GCTCACCGCG CCAATTGGTC GTGTACTGCT CAACATGAGC CTCCCCAACT TAATTGGCAT TATGACCATT CTAGGTTTCA GCCTCGCTGA CACTTTTTTT ATCAGCCAAT TGGGCACCGA AGCCTTAGCC GCCATTAGTT TTACCTTTCC AGTGACCTTA GTGATCTCTA GCATCGCCAT TGGTATTGGC GCTGGTGTCT CGACTAATTT AGGCCGACTT ATCGGTTCGG GTAATGCCCA CAAGGCCAAA GTATTCTTGC ATGATGCCTT ATTACTCACC TTTGGTTTGA TCGCCAGTTT AGCTGCACTG GGTAGCATTT TTATCGAGCC ACTGTTTCGC TTACTTGGGG CAAACGATGA CAGCTTGCCG CTGATCCACG ACTATATGAT TTACTGGTAT GTCGGTGCGC CGCTGCTGGT GTTGTTGATG GTGGGCAATC AGGGCTTACG TTCCACTGGC GATACCCGCT CGCCGGCGAT GATTATGGCG CTGGCGGCAA TCATCAATCT TATCCTCGAT CCGTTGTTGA TCTTCGGTAT TGGGCCGTTT CCACGTTTAG AAATTCAAGG TGCCGCGATT GCAACCCTGT TCGCTTGGTT GGTGGCGTTA TCTTTGTCGG GATATTTGTT GATTGTCAGG CGCAAAATGC TTGAATGGAC AGTGTTTGAC ATAGACAGAA TGCGCGCCAA CTGGACTAAA CTTGCCCATA TCGCCCAACC CGCCGCCTTG ATGAATTTAA TCAATCCCTT AGCCAATGCC ATTATCATGG CGATGTTGGC GCATATCGAC CACAGCGCAG TGGCAGCCTT TGGTGCAGGT ACTCGCTTAG AGTCAGTGCT ATTAATCGTG GTGATGGCGC TATCGTCGAG CTTAATGCCC TTTATCGCGC AGAACTTAGG TGCAGGCCAG CCACAAAGGG CGAAAGAAGC CCTGCTGCTA TCGATAAAAT TTATCTTTAT CTTCCAAACC ATACTTTATA TTCCACTGAT CTTTTTGGCT GAACCTATCG CGCACTTATT CAGTACCGAT CCGCTGGTGA TCGAGTGGTT GAGTTTTTAC ATCTTAGTGC TGCCCTGCGC CTACGGGCCT TTGGGCATAG TAATTATTGT GGCGACCTCG CTCAATGCTT ACCACAGACC TATGAGTTCA TTAGTCATCA ATCTGTGCCG CTTAGTACTG CTCATGCTGC CGCTAGCAGC CTTGGGATCG TATATAGGTG ACGTTAAAGG CCTGCTGCTC GCGCTACCTG TGACCAATAT TTTGATGGGA ATTGCCTGTT ATTGGCTGGC GCAGCGGATC TGTGAGCCCA CAAAGATCAC GACCGCAAAC GCCATTAGCG AGGGGTAA
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Protein sequence | MKDRHGLLTA PIGRVLLNMS LPNLIGIMTI LGFSLADTFF ISQLGTEALA AISFTFPVTL VISSIAIGIG AGVSTNLGRL IGSGNAHKAK VFLHDALLLT FGLIASLAAL GSIFIEPLFR LLGANDDSLP LIHDYMIYWY VGAPLLVLLM VGNQGLRSTG DTRSPAMIMA LAAIINLILD PLLIFGIGPF PRLEIQGAAI ATLFAWLVAL SLSGYLLIVR RKMLEWTVFD IDRMRANWTK LAHIAQPAAL MNLINPLANA IIMAMLAHID HSAVAAFGAG TRLESVLLIV VMALSSSLMP FIAQNLGAGQ PQRAKEALLL SIKFIFIFQT ILYIPLIFLA EPIAHLFSTD PLVIEWLSFY ILVLPCAYGP LGIVIIVATS LNAYHRPMSS LVINLCRLVL LMLPLAALGS YIGDVKGLLL ALPVTNILMG IACYWLAQRI CEPTKITTAN AISEG
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