Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0603 |
Symbol | |
ID | 5752320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 715701 |
End bp | 718589 |
Gene Length | 2889 bp |
Protein Length | 962 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641286865 |
Product | YD repeat-containing protein |
Protein accession | YP_001553041 |
Protein GI | 160873725 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0731118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCAA ACATGATTAA ATCACTGTTT AGTAAAACCC CGTCGGTTAA GGTGCTCGAT AATCGAGGGC TAACCGTGAG CGACATAGCG TACCATCGTC ATCCGGATTT ACCGCAGGTG ACGAACGAGC GTATTACCCG CTATCAGTAC GATGATTCTG GCTTGCTTGA GCAGAGTGCC GATGCGCGCC TGCACGATGC TGGTCTTGTG AACGCTATCT ATCTTAGGGA CTTAACAGGT AGCGTCTTGT GCACACAGAG CGTTGACTCT GGTATCACCA TAGCCCTTAA CGACGCCGCG GGAAGGCCGC TTGTGATGGT CAGTAACATC AGCACCAATG ACGATGGTAC AGACGACAGA AGTCAGGCGG TGACCCGCAC TTGGCAGTAT GAAGATGTCA CAAAGCTTGG TCGCCCGTTG AGTGTCACAG AGCGGAGGAA CGGCGAAGCT GCACGTATTA CGGAGCGCTT TGTATATGCT GACAATACAA GCGCAGAAAA AGCCCTCAAT CTTGCCGGCA TGTGCGTGAG CCATTACGAT ACGGCGGGTT TGGTACAGAC AGATAGCATT GCTCTGAATG GGGTACCGCT CTCTGTTAGC CGCCGCCTGA TAAAGGAAGC AGATAATCCT GACGTAATCA CAGACTGGCA AGGGGATAAC ACTTCTGCGT GGAATAGACT GCTGGCAGCA GAGTCATTTA CTACCCTGAG CACGGCCGAC GCCCATGGTG CAGTGCTCAG TACCACTGAT GCAAAAGGTC ACGTGCAGCG CGTGGAGTAC AATGTTGCCG GCCTACTTTC AGGCAGTTGG CTGAGGGTGA AGGGCGGTGC TGAGCAGGTT ATGGTCAAGT CACTGACATA CTCAGCTGCT GGGCAAAAGC TACGTGAGGA GCATGGTAAC GGTGTGGTGA CGACCTACAC CTATGAGCCC CAGACGCAGC GTCTTATTGG CATTAAAACG GAACGTCCAT CAGGTCATGC ATCTGGTGCA AAGGTGCTGC AAGACTTGCG CTACGAGTAT GACCCTGTGG GTAACGTGCT CAATATCCAC AATGACGCCG AAGAAACCCG CTTTTGGCGC AACCAGAAAG TGGTGCCAGA GAATACGTAT ACTTACGACA GCCTGTATCA GTTGGTCAGC GCCACTGGGC GCGAGATGGC CAGTGCTGGA GCACAGGACA GTCACTTACC TCGGGCAACA AGTCCCCTTT CGACAGATAA CGCTGCCTAC ACAAATTATA GCCGCACCTA CACCTACGAC AGCGCAGGCA ACCTGATACA GATAAGCCAC AGTTCCCCGG CAATAAACAA CCGCTATACG ACGGATATCA CCGTCAGCGA CCGCAGTAAC CGTGGTGTCT TAAGCACACT GACGAAAAGC CCCTCAGAGG TTGATGCATT GTTCACTGCT GGCGGGCAGC AGAAACAGCT GCAGCTGGGT CAGTCATTAA TTTGGACCCC GCGCAATGAG TTATTAAAGG TTACCCCTGT GGCGCGTGTC GAAATGACAG ACGATAGCGA GAGTTACCGT TATGACGGAA GCAGCCAGCG TATCCTGAAG GTCAGCACAC AGAAAACGAA TAACAGCATG CAGACACAGC GAGTTGTGTA TCTACCGGGA GTCGAACTGC GTACGACAAC AAGCGGCAGT AAGGAAAAGG AAAGTTTACA GGTGATTAGT GTGAGTGAAG CAGGCCGAGC CCAGGTACGC GTACTCCACT GGGCTGTGGG TAAGCCAGCA GACCTTAGCA ACGACTCGGT GCGTTATAGT TATGACAATC TCACCGGCAG TAGCACGCTT GAGCTGGACG CTGACGGAAA TCTCATCAGC ATGGAGGAGT ATTATCCTTA CGGGGGCACG GCGGTATGGG CATCCCGCAG TGCGGTGGAG GCCGATTATA GGACAGTGCG GTACTCGGGC AAGGAGCGTG ATGCGACGGG GCTGTACTAC TACGGTTACC GGTACTACCA GCCATGGGTG GGCAGATGGC TCTCCTCAGA CCCTGCGGGC ACCATTGATG GATTGAATCT GTTTAGGATG TGCAGCAATA ATCCGGTTAT GTTTGCTGAT AGTGATGGAT TGGTGGGAGA GCCAGTTGCT GCTTATGGTT TTGGTACACG AATAAAACTG AAAGAAAACA TAACCACCTT GGGAGATATT CCTATTACCA TCGATCAACT TAACAGAAAC TTAGGAATAA ACGACTTCCA TTATACTACA CTTTCTACAG TAAAAGATAA CATTTCTTCG GGTAGCAAAA TAGAAGGTGC TTCTACAATT GAAGGTAGGA TTCCTAAAAA AGAAGATAAT GCATTGTATC TAGACGTGGC CGCTGAGGTG GCGTTAACTC AAAAATGGGC AAGGTTTTTG TTGCAGAATT TTAAAAAAAT CGATATGCAA GAAAGGATTA CCTCTAAGCT GAATGCTTAC CGCAGTTTTT GGTCCTGGCT AACAGGTGGT GCTAAAAAAA TAAATCAGTA CATACAAAAG AATACACGGA TTGAAAATCA GCTCGCTTAT GAAATTAAGA ACAAAGATGC AGTTAATCTA CTTGAACAAT TTTCAAAATC CAAAGAACCA TTATGTTTAA CAGATCCAGA TCAAAATGCA TTCCTCCACG ATATAGTAAC TAGAGACTTT TTCAGGCAAA CAAGTAAATT AGGGCTAGAA TTTTTCATTC AAAGTAATAT AGATATACAT TTCACACATC TTATTCCAAC TGAGGGTACT TTTTTTACTG ATAGTGAAGC GAATGAAAGA CCATATAGAA AATTAGAGCA TAGAACGTCG GGCGACGCAG AAGCTATTAC CTTTTCAGAA TACAGGCATG CACAGAAACT GATAAATAAC CGTGATAGTC CTACGCGTAT ATCTTTTAAA AAGCTATAG
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Protein sequence | MRPNMIKSLF SKTPSVKVLD NRGLTVSDIA YHRHPDLPQV TNERITRYQY DDSGLLEQSA DARLHDAGLV NAIYLRDLTG SVLCTQSVDS GITIALNDAA GRPLVMVSNI STNDDGTDDR SQAVTRTWQY EDVTKLGRPL SVTERRNGEA ARITERFVYA DNTSAEKALN LAGMCVSHYD TAGLVQTDSI ALNGVPLSVS RRLIKEADNP DVITDWQGDN TSAWNRLLAA ESFTTLSTAD AHGAVLSTTD AKGHVQRVEY NVAGLLSGSW LRVKGGAEQV MVKSLTYSAA GQKLREEHGN GVVTTYTYEP QTQRLIGIKT ERPSGHASGA KVLQDLRYEY DPVGNVLNIH NDAEETRFWR NQKVVPENTY TYDSLYQLVS ATGREMASAG AQDSHLPRAT SPLSTDNAAY TNYSRTYTYD SAGNLIQISH SSPAINNRYT TDITVSDRSN RGVLSTLTKS PSEVDALFTA GGQQKQLQLG QSLIWTPRNE LLKVTPVARV EMTDDSESYR YDGSSQRILK VSTQKTNNSM QTQRVVYLPG VELRTTTSGS KEKESLQVIS VSEAGRAQVR VLHWAVGKPA DLSNDSVRYS YDNLTGSSTL ELDADGNLIS MEEYYPYGGT AVWASRSAVE ADYRTVRYSG KERDATGLYY YGYRYYQPWV GRWLSSDPAG TIDGLNLFRM CSNNPVMFAD SDGLVGEPVA AYGFGTRIKL KENITTLGDI PITIDQLNRN LGINDFHYTT LSTVKDNISS GSKIEGASTI EGRIPKKEDN ALYLDVAAEV ALTQKWARFL LQNFKKIDMQ ERITSKLNAY RSFWSWLTGG AKKINQYIQK NTRIENQLAY EIKNKDAVNL LEQFSKSKEP LCLTDPDQNA FLHDIVTRDF FRQTSKLGLE FFIQSNIDIH FTHLIPTEGT FFTDSEANER PYRKLEHRTS GDAEAITFSE YRHAQKLINN RDSPTRISFK KL
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