Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0565 |
Symbol | |
ID | 5752282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 654967 |
End bp | 656025 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641286827 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001553003 |
Protein GI | 160873687 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGG ATCAACAGTT TGCCCGTTTA GTAAAATTTG CCATGTTCGC CTTTGTGATG GTTTTCGGCT ATTTCATGCT GGCCGACACT ATGATGCCAT TGACGCCGCA AGCTATGGCG ACCCGTGTAG TGACTAAAGT GACACCGCAG ATCAGCGGTA AAATTCAGAC CATAGCCGTG ACTAATAATC AAGCGGTTGC CAAGGGCGAT TTGCTGTTTC AAGTCGATCC CGCGCCCTAT GAGTTAGCAG TATCGCAAGC TAAATTGGCC TTAGAGCAAG CCCGCCAAGA CAATGCTGAG TTAGATGCCT CGCTGCTGGC CGCTAAGGCC GAGGTTAATG CCAACAAAAC CACCTCGCAA CAGAAACGTA GCGAAGCTAA ACGTCTCGAT GCCCTTTATG CCACCCATGG TGTATCGCAG CAGCAAAGGG ATCAGGCCGA TAGTGATGCC GCCGCCGCGG AAGCTAATTT GCTCGCCGCC AATGCGCGTT TAGAAAAACT CAAAGTGAGC CGTGGCAGTT ATGGCGAAGA GAATCTTAAG GTGCGTCAGG CGCAAAACCA TCTTGCCCAA GCCGAGCTTA ATTTGTCTTA CACCCAAATC CATGCCGATC AGGACGGGAT AGTAACTAAC CTGCAGTTAG AAGTTGGGAG TTTTGCGACT GTGGGGCAAC CTCTGTTAGC CGTGGTATCG GATAAGATTG ATATTATTGC TGATTTTCGT GAAAAGAGTT TGCGTGGCGT CAATGCTTCA TCGACCGCTT TGATTGCATT TGATGGCGAA CCCGGCCGTT TATATCGGGC TACGGTGAGC AGTGTCGATG CGGGCGTGAG CGCGGGGCAA TTCGATGCCA ATGGCCGTTT AGCGGCGCCG CAGGAATCTG ATCGTTGGGT GCGTGATGCC CAAAGATTGA GACTGCATTT GGAGTTAGAT GGGATGGCGA TGAACAGCTT GCCAGCTGGT GCGCGTGCGA CCGTGCAACT GCTGCCTGAG AATAGCCTGT TTAGTCTGCT GGCTAAAGTG CAGATTAAAG TCATTAGCCT GCTGCACTAT ATTTATTAG
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Protein sequence | MTPDQQFARL VKFAMFAFVM VFGYFMLADT MMPLTPQAMA TRVVTKVTPQ ISGKIQTIAV TNNQAVAKGD LLFQVDPAPY ELAVSQAKLA LEQARQDNAE LDASLLAAKA EVNANKTTSQ QKRSEAKRLD ALYATHGVSQ QQRDQADSDA AAAEANLLAA NARLEKLKVS RGSYGEENLK VRQAQNHLAQ AELNLSYTQI HADQDGIVTN LQLEVGSFAT VGQPLLAVVS DKIDIIADFR EKSLRGVNAS STALIAFDGE PGRLYRATVS SVDAGVSAGQ FDANGRLAAP QESDRWVRDA QRLRLHLELD GMAMNSLPAG ARATVQLLPE NSLFSLLAKV QIKVISLLHY IY
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