Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0562 |
Symbol | metF |
ID | 5752279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 651401 |
End bp | 652288 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641286824 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_001553000 |
Protein GI | 160873684 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTC ATCACGCACA ACATTCACAA TCGCTGAACC AGAGCTTGTC TGAGCTTAAT GGCGATATTA ATGTTTCTTT TGAGTTTTTT CCGCCATCGA CCCCCGAAAT GGAACAGATC CTGTGGAACT CTATTCGTCG TTTAGAGCCG CTTAATCCTA AATTTGTGTC TGTGACCTAT GGCGCTAACT CAGGTGTGCG CGACCGCACC CACGGCGTGA TTGAGCGTAT TCAACAGGAA ACGGATCTTG TTGCCGCGCC GCACTTAACC TTAGTGGATG CTAGTGATGA AGAGCTATTA GAACTGGCTA AGCATTACTG GAAATCGGGC ATTCGTGACA TAGTGGCACT GCGGGGTGAT TTACCTGCGG GCAGCCCCAA GCCCACTCGT TTTGCGGTGG ATTTAGTACG TTTGCTGCGC TCAGTGGCCG ACTTTGATAT TTCCGTTGCA GCTTATCCAG AAGTGCATCC CGATGCGAGC AACGCACAGG CGGATTTGAT CAACCTTAAG CGTAAGATTG ATGCGGGCGC TAGCCGTGCC ATTACCCAGT TTTTCTTCGA TGTGGAATCT TACCTGCGTT TTCGTGACCG CTGCGTTGCC GCCGGTATCG ACGTTGAAAT CGTGCCAGGC ATTTTGCCTG TGACTAACTT TACCCAGTTA AAACGTTTCG CGGGCATGAC CAATGTGTCG TTACCGGGCT GGCTACACAA GCAATTCGAT GGTTTAGAAA ACGATGCCGG TACACGCCAA TTGGTGGGCG CAAACGTGGC AATCGACATG GTAAAAGTCC TGTCCCGTGA AGGCGTGAAG GATTTCCACT TCTACACCTT AAACCGCGCC GAACTGACCT ACGCCATTTG CCATACGTTA GGTGTGCGCC CTAAGTAA
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Protein sequence | MAFHHAQHSQ SLNQSLSELN GDINVSFEFF PPSTPEMEQI LWNSIRRLEP LNPKFVSVTY GANSGVRDRT HGVIERIQQE TDLVAAPHLT LVDASDEELL ELAKHYWKSG IRDIVALRGD LPAGSPKPTR FAVDLVRLLR SVADFDISVA AYPEVHPDAS NAQADLINLK RKIDAGASRA ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS LPGWLHKQFD GLENDAGTRQ LVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPK
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