Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0528 |
Symbol | |
ID | 5752245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 607620 |
End bp | 608837 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641286790 |
Product | ABC-2 type transporter |
Protein accession | YP_001552966 |
Protein GI | 160873650 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.089523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGC TCATCGCGTT AATTCGCCGT GAGCTCAGTG CCCTGTGGCG CGATCCTTGG CAGTTGGCGC TGATCAGTTA TATTCCGCTG ATCGGGATTT TCTGCCTGTG GTGGCTGTTC AGTGCAGGCT TACCGAGGCA ACTGCCGGTG GCGATTGTCG ATCAAGACCA CAGTCAATTA AGCCGTATGC TGACCCGTCA GCTGAAGGCT AATCCTGTGA CTGATCCACA AAACTTCACC GATTTAGCCG CGGCGGTGTC GGCGATGCAG CAGGCGAAAG TCTACGCTAT CGTGGTCTTT CCCTATGATA TGAAAAAAGA TTTGCTCACT GGCCACAAGC CCACCATAGA TGTGCGCTAC AACAGCCAAT TTTTGCTGGT GGGTAAGTTA CTCTCAAGCC AAATTCAGCT GAGTCTGGGT GACGGCTTGT TGCAAGTAGC GGGCTTAAAA CAGCTCGCCA ACGGTACACC TAAATCCCAA GTGGCAGTCA ATTTAAGCCC AATCAAAAGC CAAACAACGG CTTTGTTTAA CCGAAATAAC AACTATATAG GCTTCTTAGT GCCGCCAGTG CTCGTTGCGC TTTGGCAATT ATTATCTATG TTGGTCATGG CCAACAGCTT AAATCGAGAG CTGCATTTAG CGCCCACGAC TCAGGTCAAT GGCATATCGA ATACCTTAAC CGAGCATTTT TGGCCTAAGG TGCTGGCGAA ATTGGTGTTG TTTACGCCGA TATTGATGCT GCAGGGCTGC TTTATTTTAA CTTGGCTGTA CTTGTATCTC GCGTTGCCGA TGGCGGGCAG TTTAGCCCTA TTGCTGTTAG CACAATTAGT GATGTTGCTG GCGGTCTGGA GTCTGGTGTT ATTAATCTTT GTGGTAATGC GTGACAGTGC GCGGGTTATC AGTTTTTGCA CCGCCTTATT TGCGCCCGCT TTTGCCTTTA TGGGGATCAC TTTCCCTACC CATGATATGC CGCAATTGGC GCAGTGGTGG CGACAGATAA TGCCGTCGAG CCACTATATT GAGTCCCACG TGAGTGTCGT CAGTTATGGC GCCGCTTGGC CGAATGTGGC GATCCAGCTC AGCAGTTATT GGGGCTTTAT CTGTTTGCTG CCTTTGATAT ATTTGTTATC GCGTAAATTA CTGCCGATCA CGATCACCGC CAATACTATC GTGACCGCAT ATGACTCGGA CGCAGCCTTA CCTGCGAAGG AGCAATAG
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Protein sequence | MALLIALIRR ELSALWRDPW QLALISYIPL IGIFCLWWLF SAGLPRQLPV AIVDQDHSQL SRMLTRQLKA NPVTDPQNFT DLAAAVSAMQ QAKVYAIVVF PYDMKKDLLT GHKPTIDVRY NSQFLLVGKL LSSQIQLSLG DGLLQVAGLK QLANGTPKSQ VAVNLSPIKS QTTALFNRNN NYIGFLVPPV LVALWQLLSM LVMANSLNRE LHLAPTTQVN GISNTLTEHF WPKVLAKLVL FTPILMLQGC FILTWLYLYL ALPMAGSLAL LLLAQLVMLL AVWSLVLLIF VVMRDSARVI SFCTALFAPA FAFMGITFPT HDMPQLAQWW RQIMPSSHYI ESHVSVVSYG AAWPNVAIQL SSYWGFICLL PLIYLLSRKL LPITITANTI VTAYDSDAAL PAKEQ
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