Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0519 |
Symbol | |
ID | 5752236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 594431 |
End bp | 595441 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641286781 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001552957 |
Protein GI | 160873641 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000295389 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCAA TTTTTGTTCG TGGTATTTCA AACCAATTCC GTCTGACACT GGCAATTATT TTGTCGGTGG CCTTGCTTGT GGCTAATCAT CGCCTCGATC CTGTGCGGCA AAACCTATCC TCTGTCTTTA GTCCATTACA GTATTTAGCC AGCGTGCCCG GTGCGGCGCT TGACTGGTCA TCTGAAAGTT TTGCCACCCG CAATATGCTG GCGTTGCAAA ATAAAGAGCT GCTCAGGCAA CAACTGCTGA TGAGTGAACG CTTACAGCGT TTCGAACACT TACGCCAAGA AAATGAGCGT TTGCGTGCAC TGTTAGGCTC ACCCGCCTAT CTGGATTCGC GCAAGATGGT GGCCGAAGTG CTAGAGGTCG CCAGCGATCC TTTCCATCAT TACGTGGTGC TGAATCATGG TTCCCGTAGC GGGGTATTTG TCGGTCAGCC CGTGGTGGAT GCACAAGGTG TTGTCGGCCA AGTGGTGCAG GTCAGTGAAA TGACCAGCCG GGTGTTATTG CTCTCCGATG TATCGCACGG ATTACCTGTG CGTATTACCC GTAATGATGT GCGCCTTGTC GCCAATGGTA CGGGTGAGCT TGATGAGATA GAACTGCGCC ATGTGGCCAA GAGTACTGAC ATTCGTGTCG GCGATTTATT GGTGACTTCA GGCTTAGGCA ATCGTTTCCC CGAAGGTTAT CCCGTTGCGC GAGTCATGGA GGTTTTGACT GAAGATGGTC AAAGTTACGC TCGAGTCACG GCCCAACCGT TAGCCGCTTT AGATCGTATT CGTTATGTGT TGTTGATTTG GCCGTCTCCC GATTCGGGTG TGACCTTGCC TAATCAGCCT ACAGTCCCCG CTGCGGATCA TTCGCTTATT GAAAACTCAT CAAAAATTGG CAGTGCGAGT CCAGCGGAAG GTACATCTGC AGACACGACT AAGCCTGTGA CTACACCCGC AGCCACTGTG GCCAAACCGG CAACGGAAAC CACTCCTCCA GCGACTGAGG TGCACCAATG A
|
Protein sequence | MKPIFVRGIS NQFRLTLAII LSVALLVANH RLDPVRQNLS SVFSPLQYLA SVPGAALDWS SESFATRNML ALQNKELLRQ QLLMSERLQR FEHLRQENER LRALLGSPAY LDSRKMVAEV LEVASDPFHH YVVLNHGSRS GVFVGQPVVD AQGVVGQVVQ VSEMTSRVLL LSDVSHGLPV RITRNDVRLV ANGTGELDEI ELRHVAKSTD IRVGDLLVTS GLGNRFPEGY PVARVMEVLT EDGQSYARVT AQPLAALDRI RYVLLIWPSP DSGVTLPNQP TVPAADHSLI ENSSKIGSAS PAEGTSADTT KPVTTPAATV AKPATETTPP ATEVHQ
|
| |