| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0411 |
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| Symbol | murD |
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| ID | 5752121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 468050 |
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| End bp | 469369 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641286669 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001552852 |
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| Protein GI | 160873536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000621581 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAATC AGTATTCACA CATAGTGTTA GGTTTAGGGG CAACGGGTTT GTCCGTCGTG
CGCTATTTGT GTGGAAAGGG CATTACGCCA TTGGTCATGG ACAGTCGTCG GCAGCCTCCG
GGCGCCGAAA CATTAGCGAC GTCTTTTCCT GATGTGAAGC TGATTTCTGG CGGATTCGAT
TGCCGTTATC TCGTGCAAGC GACGCAGATC ATTATCAGTC CCGGCATTGC CACTTATACC
CCAGAGGTGC GTGCCGCTGT GGATATGGGC ATCGAAGTGA TTGGCGATGT GGAGCTATTT
GCTCGTGAGA TTGCTGACCG TAAACCTTGC GTTATCGGTA TTACTGGCTC TAACGGTAAA
TCAACTGTCA CTACGCTTGT AGGCGAAATG GCAAGGGAAG CGGGTATTGC CGTTGCCGTT
GGTGGCAATA TCGGTGTGCC TGCGCTGGAT TTACTGCATG AAAATGCCGA CTTATTTGTG
CTTGAGTTGT CGAGCTTTCA ATTGGAAACC ACCCATAGCC TTAAGTGTGT GGTGGCGACC
TGTTTGAATA TCAGCGAAGA CCACATGGAC AGATACAGCG ATATCGCAGC CTACCGCGAA
GCTAAATTAC GTTTATACAA ACAAAGCCGC GCCGTGCTGT TTAATCGCGA CGATAAACTG
ACCGTACCGC CAGAGCCAAT GAACCAAAAC AGTTTTGGTT TAGCTGCGCC AGAAGCGGAC
GAATGGGGTA TCAGCGACAG CAAGATTTAT CACGGCAGCA GCGAAATCAT GCCGATCACT
GAAGTCTCCC TGATTGGTAG CCATAACCAT GCCAACCTAC TCGCAGCAAT GGCGCTTGTG
GATGTTGTCG GTGTTGATAA GCAGGTTATG GCGAAAGTGG CGCGTAGCTT TACTGGCTTA
TCTCATCGTT GTGAAGTGGT TGGGATTAAG AATGGCGTGA CCTATGTCAA TGACTCGAAA
GCGACGAACG TCGGCGCCAC CGTTGCCGCG CTCGATGGTT TGAGTGATCA CTTAGGCGAT
ATTATTTTGA TTGCTGGCGG CGACGGTAAA GGTGCTGATT TTAAACCTTT AGGCGTGGCA
TTAGCGAAAG TAACACACCT CATTACCTTA GGTCGCGATG GCAAAAAGAT TGCCGCTTTA
AAAGACGGCG CGGTCAGAGT CGAGACTATG GCGGCTGCGG TGGCTAAAGC CGCTGAATTA
GCGACCTCTG GCGATATCGT TTTATTGTCG CCAGCCTGCG CCAGTTTAGA TATGTACAGT
AACTTTATGG CTCGAGGTGA CGATTTTAGA AACCTTGTGG AGCAACTCAA TGGCGAGTGA
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| Protein sequence | MQNQYSHIVL GLGATGLSVV RYLCGKGITP LVMDSRRQPP GAETLATSFP DVKLISGGFD
CRYLVQATQI IISPGIATYT PEVRAAVDMG IEVIGDVELF AREIADRKPC VIGITGSNGK
STVTTLVGEM AREAGIAVAV GGNIGVPALD LLHENADLFV LELSSFQLET THSLKCVVAT
CLNISEDHMD RYSDIAAYRE AKLRLYKQSR AVLFNRDDKL TVPPEPMNQN SFGLAAPEAD
EWGISDSKIY HGSSEIMPIT EVSLIGSHNH ANLLAAMALV DVVGVDKQVM AKVARSFTGL
SHRCEVVGIK NGVTYVNDSK ATNVGATVAA LDGLSDHLGD IILIAGGDGK GADFKPLGVA
LAKVTHLITL GRDGKKIAAL KDGAVRVETM AAAVAKAAEL ATSGDIVLLS PACASLDMYS
NFMARGDDFR NLVEQLNGE
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