Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0312 |
Symbol | |
ID | 5752022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 355779 |
End bp | 357590 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641286570 |
Product | GTP-binding protein TypA |
Protein accession | YP_001552753 |
Protein GI | 160873437 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTAGAGA ATTTACGTAA CATCGCCATT ATTGCACACG TTGACCATGG CAAAACGACC CTGGTAGACA AGTTGCTGTC ACAGTCAGGC ACCCTTGCAA CCCGAGGAGA AGCCACTGAG CGGGTGATGG ACTCCAACGA TCTTGAAAAG GAACGTGGGA TCACGATTCT GGCAAAGAAT ACTGCCATCA AGTGGAACGA CTACCGTATT AACATCGTTG ATACCCCTGG CCACGCCGAC TTCGGTGGTG AGGTTGAGCG TGTTCTGTCT ATGGTTGACT CAGTATTATT GCTGGTTGAT GCCGTTGACG GTCCAATGCC ACAAACTCGC TTCGTAACGA AGAAAGCGTT TGCTCAAGGC TTAAAGCCAA TCGTTGTTAT CAACAAGATT GACCGTCCAG GTGCACGCCC AGATTGGGTT ATCGACCAAG TATTCGACCT GTTCGACAAC TTAGGCGCAA CCGACGAGCA GTTAGATTTC CCAATCGTTT ACGCTTCTGC GTTAAACGGT TTTGCAACTT TAGATCCGGA TGTAGCGAGC GATGATATGA CGCCGCTGTT CCAAACTATC GTTGAAAAAG TATCTTTCCC AGATGCTGAC GCCGAAGGTT CGTTCCAGAT GCAAATTTCG CAAATCGACT ACAACTCATA CGTGGGTGTT ATCGGTATCG GCCGCATCAA GCGTGGTAGC GTTAAAACTA ACCAACAAGT GACCATTATT GGCGCTGATG GCAAAACTCG TAACGGTAAA ATGGGCCAAG TATTAGGTTA CATGGGTCTA GACCGTACTG AAGTTGAAAT TGCTAACGCG GGCGACATCG TTGCTATCAC AGGTTTAGGC GAGCTGAAAA TTTCTGACAC TATCTGTGCC GTTGGCGCAG TAGAAGCAAT GCCTGCTTTG ACTGTTGATG AACCCACTCT GACTATGACT TTCCAAGTTA ACACTTCACC TTTTGCTGGT AAAGAAGGTA AGTATGTGAC TTCACGTAAC ATTCTGGAAC GTCTGCAAAC AGAATTAGTC CACAACGTGG CACTGCGTGT TGAAGAAACA GAAAGTCCAG ATCGCTTCCG CGTATCTGGT CGTGGTGAAT TGCATTTATC AATCCTGATT GAAAACATGC GTCGTGAAGG TTACGAGTTA GCCGTATCAC GTCCAGAAGT AATTCTGAAA ACCATCGACG GTGAACTGTG TGAACCATAC GAGACGTTGA CTGTTGACGT TGAAGAAGAA GATCAAGGCA CAGTGATCGA GAAGTTAGGT ACCCGTAAAG CTGAAATGAA AGACATGCAG CTTGATGGTA AAGGTCGTGT GCGTATCGAC TTCATCATCC CAAGCCGTGG TTTAATCGGT TTCCAAACTG AATTCTTAAC TGCGACTTCT GGTACTGGTC TAATCTACCA CTCGTTCGAC CATTACGGTC CACACAAAGG TGGCGATATC GGTCAACGCG CTAACGGCGT ATTGATCTCT AACGCTACTG GTAAGGCTCT GACCTTCGCA CTGTTCGGTC TACAAGATCG CGGTCGTCTC TTTATCGGCC ATGCCGCTGA AGTATACGAA GGCCAAGTAG TTGGTATCCA CGCTCGCTCA AACGATCTGA CAGTTAACTG TCTGAAAGGT AAGCAGCTGA CCAACATGCG TGCTTCTGGT ACTGACGAAG CTCAAGTACT GACTACGCCA ATCACAATGA CACTTGAGCA AGCGCTTGAG TTCATCGATG ATGACGAATT AGTTGAAGTA ACGCCTAAGA ACATTCGTGT TCGTAAGAGA CACTTGACTG AAAACGATCG TAAGCGCTTT AACCGCGCTT AA
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Protein sequence | MLENLRNIAI IAHVDHGKTT LVDKLLSQSG TLATRGEATE RVMDSNDLEK ERGITILAKN TAIKWNDYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTKKAFAQG LKPIVVINKI DRPGARPDWV IDQVFDLFDN LGATDEQLDF PIVYASALNG FATLDPDVAS DDMTPLFQTI VEKVSFPDAD AEGSFQMQIS QIDYNSYVGV IGIGRIKRGS VKTNQQVTII GADGKTRNGK MGQVLGYMGL DRTEVEIANA GDIVAITGLG ELKISDTICA VGAVEAMPAL TVDEPTLTMT FQVNTSPFAG KEGKYVTSRN ILERLQTELV HNVALRVEET ESPDRFRVSG RGELHLSILI ENMRREGYEL AVSRPEVILK TIDGELCEPY ETLTVDVEEE DQGTVIEKLG TRKAEMKDMQ LDGKGRVRID FIIPSRGLIG FQTEFLTATS GTGLIYHSFD HYGPHKGGDI GQRANGVLIS NATGKALTFA LFGLQDRGRL FIGHAAEVYE GQVVGIHARS NDLTVNCLKG KQLTNMRASG TDEAQVLTTP ITMTLEQALE FIDDDELVEV TPKNIRVRKR HLTENDRKRF NRA
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