Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0301 |
Symbol | |
ID | 5752011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 341205 |
End bp | 341717 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641286560 |
Product | peptidase M23B |
Protein accession | YP_001552743 |
Protein GI | 160873427 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.11703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTAA CATATGTTGG ATTAGCACTA TCGTTACTGC TACTTGGCGG CTATCTGATC CCTGAGTCAC CGGTGATCCC AGTCAAAGGC GCCAGCAGTA AAGATTGGAA CAGCCAAACC TTTTGGTATG AAACTTGGGG CCCATCGGGC GTACATAAGG GGATAGATAT TTTCGCCGCC AAAAACACCG CCGTGATTGC GCCAACGCCT ATGCTGATCT TCTATCGAGG CGACTTCTTT AAAGGAGGCA ATGTGGTCGT TGGTCTAGGT CCTAAATGGC AAATTCATTA CTTCGCCCAT TTAGCGCAAA TTGAATCAAC AACGGGATTA ATTGCCCACC AAGGTGAAAC GCTGGGTACT GTCGGCGATA CGGGTAACGC TCAAGGTAAA CCGCCACATT TGCATTATTC CATTTTGAGC TTATTGCCTA AACCTTGGCT AATAGATACT TCAACCCAAG GATATAAAAA GGCCTTTTAT CAAAACCCCA TCAGCTACTT AGAAGCACAC TAA
|
Protein sequence | MKLTYVGLAL SLLLLGGYLI PESPVIPVKG ASSKDWNSQT FWYETWGPSG VHKGIDIFAA KNTAVIAPTP MLIFYRGDFF KGGNVVVGLG PKWQIHYFAH LAQIESTTGL IAHQGETLGT VGDTGNAQGK PPHLHYSILS LLPKPWLIDT STQGYKKAFY QNPISYLEAH
|
| |