Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0297 |
Symbol | |
ID | 5752007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 336523 |
End bp | 337692 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641286556 |
Product | diguanylate cyclase |
Protein accession | YP_001552739 |
Protein GI | 160873423 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTTG ATCCCCAAGC CCTATTACTC ATCAAATTTA TTTGCCTACT GGCCAGCACC GCAGCCGTGG CATGGGGACT CATTGCTAAA CCCTTACAGA TTGCCACTCG GGCCAGTATG CGCTTTTCTC TGGCGAACTT GTTCGTCTTC CTTGGCATCA TACTCAACAG CCAACGCTCA GAAGCCTCCA GTTACCTTTT TTGGTTCTGC TCCGATATGG CTATTTTGTT TGGATTCATC CTATTACGCT GGGGTACTAA GGCACTTTTC AGGCTGAGTC CCAGCGTTAA ATCCGATCTT ATTCTCTTGG CAATCACGGC CAGTGTGATG CTCTCGGTTC CCCCCAACTT CAGCTCAGAA CGTACTTTAG CCGTTGTTTT CTCCGCCTGC GCCGCGCTGA TTTTTACCAT GCTAACGCGG GATAACTATC AGGCCATTAA ACGCGATACG GGGAATCGAG TCGCCATCGC TATGGTCATG CCTTTAGTCG CTATGGTGGG TATTTTTATC ATTCGCATCT TTATCGCCCT GCTTTCCCCA GAAGAAAGTC CGATGTTTAT CGCCATGCAC ACGCACGAAG CGATACCTGT GCTGTGGTTT TATGTATTTC TAACCCTATT GATCAATATA GTGATGATAG GTAATGCCAT GACGCGACTC GTCAGCAAAA TCCGTATGTT AGCGGAACGG GATCAACTCA CAGGGCTGTG GAATCGCCGA GCTATGCATA AATTTCTCAA CAATATCCAT CAACGCTGGC TAAGGGATAA TGTGCCTTAC AGTATGATTT TATTGGATCT TGACCATTTT AAAGAGATTA ACGATCAATA CGGCCACGAT GCGGGTGATC TCGCCCTGCT GACGGCGGCG AGACTGTTCG GATCGGTATT GCGAGAAAAT GATGCCCTAT GTCGTCACGG TGGAGAGGAG TTTCTGGTGA TTTTGCCCGC GACCGATGCA CCCGCCGCCA GAGCCGTTGC CGAGAAATTG CATCAAGTAC TTAAGGACAA TTCATTTATC TGGCAAGGTG TTACGATAAA AATCCATGCC AGTTTAGGTT ACGCCACTAT CTATCAAGGA TGCCAGCCCG ACAAGCTACT CATTCAAGCG GACCAAGCCA TGTACCGCGC CAAATCCGAA GGTCGAGACC GTATTTGCCA AGCTTGCTAG
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Protein sequence | MIFDPQALLL IKFICLLAST AAVAWGLIAK PLQIATRASM RFSLANLFVF LGIILNSQRS EASSYLFWFC SDMAILFGFI LLRWGTKALF RLSPSVKSDL ILLAITASVM LSVPPNFSSE RTLAVVFSAC AALIFTMLTR DNYQAIKRDT GNRVAIAMVM PLVAMVGIFI IRIFIALLSP EESPMFIAMH THEAIPVLWF YVFLTLLINI VMIGNAMTRL VSKIRMLAER DQLTGLWNRR AMHKFLNNIH QRWLRDNVPY SMILLDLDHF KEINDQYGHD AGDLALLTAA RLFGSVLREN DALCRHGGEE FLVILPATDA PAARAVAEKL HQVLKDNSFI WQGVTIKIHA SLGYATIYQG CQPDKLLIQA DQAMYRAKSE GRDRICQAC
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