Gene Sbal195_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0280 
Symbol 
ID5751990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp320428 
End bp321888 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content44% 
IMG OID641286539 
Productdiguanylate cyclase 
Protein accessionYP_001552722 
Protein GI160873406 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATA ACGCTTGGAA TGATAAGAAT AAATTTATTT GGCTGCTCTC TGTTTTGCTT 
TTAGTCGCCT TCTTAGTGAC CAGTGGTATC AGTTATAAGG TGGCCCATGA CTCACTGAGT
CAACAAATCG AGAGTAATAC CCTCCCGCTC ACAAGTGACA ATATTTACTC AGAAATTCAA
CAGGACCTGC TGCGACCTAT CTTTATTTCA TCCTTGATGG CGCAGGATAC TTTTGTTCGC
GATTGGACAT TAAGCCACGA GCAAGAGCCA GAAAAACTGA TCCGTTACCT TAAGGAAATC
CAAGAGAAAT ACGATACAGT TACCAGTTTT TTTGTGTCAG AGAAAAGTCG GCATTATTAC
CACTCCACGG GCATTTTAAA ACAAATCCAA GATGTTGAGC CCGATGATGC TTGGTACTTT
CGAGTGCGCT CTTTACCCGA ATCTGAGCAT TATGAGGTCA ATATTGATGC TGATACGGCG
GACCGCAGTA AAACAACCGT ATTCGTAAAC TATAAAGTTT TTGATTTTGA AGGCAAATTT
ATAGGCATTA CCGGTGTGGG TTTGGCGGTT GAAAAGGTTA AGTCCCTCAT CGAGCTTTAT
CAAAAACGTT ATAACCGTCG AGTGTTCTTT ACCGATCGGC AGGGCAATGT CACTTTGCAT
GGCGATGAAT ATGATGGTGC GGATTCGCTG CAAACCAGTC CAGGGCTTGA AAATTTAGCG
ACGCGTATTT TAACCAGTCC AAGTGCGGCT TTTAGCTACC AGAGAAATGG TAAAACCGTT
TATCTCAACA GCCGACTAGT CCCTGAGTTT AAGTGGTACT TGATTGTTGA GCAGGAAGAT
GCGCCTCAGG AGCGGGAGTT ACTGAATACT TTTTGGGGCA ACTTGGGCTT AAGCCTAATG
GTGACCCTAG GGATTTTATT TATCTCCAAC ATGACCTTAG GTCGTTATCA GCGCAAATTA
GAAGTAATGG CGTCTACCGA TAAGCTTACT GGCGCCGCTA ACCGTCAGGT GTTTGATGAG
TACTTTAGAC AGGCGTTAGA TAAGGCTAAG TTGGCACAAT CGCCGATTTC AATACTCTTG
CTGGATATTG ACCACTTCAA AAAAGTGAAC GATAGCTATG GGCATGGGAT TGGTGACTTA
GTATTAAAAA CCATGACGAA TATGTTGCGT GGCGCGCTGC AGCAAGAGGA TATCTTATGT
CGTTGGGGCG GCGAGGAGTT CTTGATTTTA CTTCCGGGGA TGGATTTAAC CCGAGCGGCA
GAACTGGCTG AACAGATCCG TGAGCTTATT TTTCAGCGGG AAATTAAAGT GAATGGATTA
CATATTTCTA TTACTGCCAG TATCGGCGTC GCCGAGCATC AGGCGCAAGA GCCTGCAGAA
GATCTGATCA AACGTGCCGA TCTGGCCTTG TATCAGGCTA AGGAAGCCGG TCGAAATCAA
GTGGTGTTAA ATCATTCATA G
 
Protein sequence
MGNNAWNDKN KFIWLLSVLL LVAFLVTSGI SYKVAHDSLS QQIESNTLPL TSDNIYSEIQ 
QDLLRPIFIS SLMAQDTFVR DWTLSHEQEP EKLIRYLKEI QEKYDTVTSF FVSEKSRHYY
HSTGILKQIQ DVEPDDAWYF RVRSLPESEH YEVNIDADTA DRSKTTVFVN YKVFDFEGKF
IGITGVGLAV EKVKSLIELY QKRYNRRVFF TDRQGNVTLH GDEYDGADSL QTSPGLENLA
TRILTSPSAA FSYQRNGKTV YLNSRLVPEF KWYLIVEQED APQERELLNT FWGNLGLSLM
VTLGILFISN MTLGRYQRKL EVMASTDKLT GAANRQVFDE YFRQALDKAK LAQSPISILL
LDIDHFKKVN DSYGHGIGDL VLKTMTNMLR GALQQEDILC RWGGEEFLIL LPGMDLTRAA
ELAEQIRELI FQREIKVNGL HISITASIGV AEHQAQEPAE DLIKRADLAL YQAKEAGRNQ
VVLNHS