| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0274 |
|---|
| Symbol | |
|---|
| ID | 5751984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 312569 |
|---|
| End bp | 314524 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641286533 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001552716 |
|---|
| Protein GI | 160873400 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTTA CTCGTAAAAT TCAGCTGATC AGTTTATTGA TTGTCCTACT ACCCCTCATA
TTTGCTACCG CGATAGTGAC TTACATTGCT CGGGATGAGT TATTTGCCGA GGCTCAGTCT
CGTTTAGTGG CGGTGCGCGA GATCAAGCAG CGACAGATTG TCGGTATGTT TCAGGACTTT
TCAGATAACC TGCAGGCCGT CAGTGCGGTG ATCGCCAGCC AAAAAAGCCT CGATACTATC
TCCGACCTTG ATGAGACCTT AAAGTCGTTA AATAAGTCTT TAGGTTTCTA TGATCTGTTC
ATCATTCGGG ATGACGGCAC TGTGTTTTAC ACCGCCGCGA AGGAGTCGGA TTTCGGCACA
AATCTTCGCA CTGGGCCCTA CCATGATTCG GGGTTAGCGC AGTTATTCAA CAAGGCATTG
GGGTCGACTG GTACTGTATT GCTGCAAGAC TTCTCCGCAT ACGCTCCTTC AAATGGTCAA
CCGGCAGCAT TTATTGGTCA GTCGATTCAA TTCAACCAGC AAAGATTAGT GGTGGCGGCT
CAAGTATCAA TCGACCGCAT CAACCGAGTT ATGCAGATCC GCGAAGGTAT GGGACAAAGT
GGCGAGACCT ATTTAATTGG CCCCAATAAT CGCATGCGTT CCGATTCTTT TCTTGACCCG
AACAATCGCA CTGTGACCGC CTCCTTCGCT GGAACGGTTG CCCAGAATGG TGTTGACACA
CTTGCGGTGA AAGAGGCGCT GGCGGGTAAG ACTGGTGTGA TGCAAGTGAA TGACTACAAT
CATAATCCGG TGTTATCTGC CTATTCTCCC GTTGTTGAAC TTGGCTTACG TTGGGGCTTG
ATGGCTGAAA TTGATGTGAG CGAAATCGCT GCGCCAGCCT ATCGAATGCT ATTTATCGGC
TTATTTGTTT GTGTGGCGGC CTTAGTGTTG GCATTCGCTG CCGCTAAGTT AGTCACAGGA
TTTGTGTTGA AGCCACTCGG CGGTGAGCCT GAGGATATGT GTAACTTGAC CAGCATGATC
GCTTCTGGCG ATCTCACCCA TAATCTGCCC CATGTTCAAA CGGATAATCA TCTGATGAGC
TGGTTGGCCC GGATGCAAAC AAAGCTCAAA GAAATCATTA GTCAGCTGGT GGGCGTTGGA
CATGAACTCG AATCCGCCGC TGAACAAAAC TCGGCCGCTA TGACCCAAGC CGATTGCAGT
ATTCAGATGC AGGCGAAAGA GACCGATATG TTAGCAACCG CAGTCGAAGA AATGAGTTAT
GCCGCCGCGG AAATCAGCAC TAATACGCTT AAATCCTCCG ATGAAGTGTC AGCCTGTACC
CATTCGAGTG AAATTCTTTC GCAAAATTTA GCCAGTACAC GTAAAAGCTT GAAAGTGACC
TTGAGCAGTT TTGCGACCAT TCATCAACAG GTGGGCAGCC TTGAGGCCGA CAGTCAGAAA
ATCGGTTCGG TATTGGCTGT GATTAATGCG ATAGCCGAAC AAACGAATCT GCTGTCACTT
AATGCGGCGA TTGAAGCGGC GAGAGCTGGT GAACATGGTC GTGGCTTTGC CGTAGTTGCC
GATGAGGTGC GCCAGTTAGC AGTTAAGGTT CAGTTGGCGA CTCAGGATAT TGGCCAAGTG
TTAAAAGGCA TTCAGCAGCA GTCTGGCGTG TTGGCACTGC ATAGCGTGAC TTGTACTACA
GAAGCCTCTA AAACCGCAGA AGATGCCGAT GGCATGCAAG CCGCAGTGGA TGACATCGCT
TTACGTTTGG AAACCTTAAA GGCATTAATG ATCCAAACCG CCACCGCCGC GGAGGAGCAA
ACAACGGTTT CGGCAACGAT TGCACAGGGG ATTGCGGGCT TGAGCGTGGC GGCGGAAGAA
AATAGCGCGG CGATCAGCCA AGTGGCAGCG AGTACTCGCA GTTTGTTAGG GTTAGCGAAT
CAGCTTGGTT TAACAACGGC ACAGTTTAAG GTGTAG
|
|---|
| Protein sequence | MGFTRKIQLI SLLIVLLPLI FATAIVTYIA RDELFAEAQS RLVAVREIKQ RQIVGMFQDF
SDNLQAVSAV IASQKSLDTI SDLDETLKSL NKSLGFYDLF IIRDDGTVFY TAAKESDFGT
NLRTGPYHDS GLAQLFNKAL GSTGTVLLQD FSAYAPSNGQ PAAFIGQSIQ FNQQRLVVAA
QVSIDRINRV MQIREGMGQS GETYLIGPNN RMRSDSFLDP NNRTVTASFA GTVAQNGVDT
LAVKEALAGK TGVMQVNDYN HNPVLSAYSP VVELGLRWGL MAEIDVSEIA APAYRMLFIG
LFVCVAALVL AFAAAKLVTG FVLKPLGGEP EDMCNLTSMI ASGDLTHNLP HVQTDNHLMS
WLARMQTKLK EIISQLVGVG HELESAAEQN SAAMTQADCS IQMQAKETDM LATAVEEMSY
AAAEISTNTL KSSDEVSACT HSSEILSQNL ASTRKSLKVT LSSFATIHQQ VGSLEADSQK
IGSVLAVINA IAEQTNLLSL NAAIEAARAG EHGRGFAVVA DEVRQLAVKV QLATQDIGQV
LKGIQQQSGV LALHSVTCTT EASKTAEDAD GMQAAVDDIA LRLETLKALM IQTATAAEEQ
TTVSATIAQG IAGLSVAAEE NSAAISQVAA STRSLLGLAN QLGLTTAQFK V
|
|---|
| |