Gene Sbal195_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0260 
Symbol 
ID5751970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp299628 
End bp300992 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content49% 
IMG OID641286519 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001552702 
Protein GI160873386 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.018475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTAT CGACTGTGCC TAATCGTTTA TTTATCAAAT TATTGCTCGG ATTCTGGCTC 
TGCAGCTCGC TGATCATTGC CTTGGTCGGT CTGTTGCCAT TGCTGCAACA GAGCCACGAT
CGTGCACCAC TGCCACCTCA CCTTGAAAAA GTCCTATCGA CTATAGCTAA GCGCATTCAA
GAAAACCCCG CCTTACTGGA GTCTGATTTT CTTCGCCGCT GGGAAAGACA CAGAGACATG
GAAGGCAAAC CTCTGCGGGT TTATCTCGTC AACAGCCAAG GCCAAGTCGT CAACACCCAT
AGGGTGAGTC GCGGTGTGCG TAGCTTTATG TTGATGGCAG ATGAAGAAAA ACAACCTATT
AGCCATCAGT TTAAAGATGA GTTGGTGTTT GGTCCCTTTC AATTCAATCT GGGCGCCGAG
ACGTATTCAC TCTACGGCCG TCTGCCGGAT AACCATCCGC GGCCTTGGTT CTTCTTCTTC
GCCGAAAATA AGTTATTAAC TTTAAGCCTA GCGATTTTCC TGTCGGGACT ATTATGTGGC
CTGCTCGCTT GGCATCTAGG TAAGGCATTA AATTCACTTA AAAAGAGTGC CAATGCCCTC
GCTGAAGGTG ACTTAAGTAA CCGTGTCGAT AAGTCCACCA CTCAGCGCAA CGACGAAATT
GGTCAGCTCG CCACGGCTTT TAACAGCATG GCCGACTCCA TCGAAGCTAT GGTGAATAAT
CAGCAACGAC TCATGGGGGA TATTTCCCAT GAACTGCGTA CCCCATTGAC GCGACTGCAA
TTATCCCTCG CCCTCGCCCG TAAAAAAGGT CAACAAACCG CCGAAACTGA ACGCATAGGT
TATGAAGCCG AGCAACTCGA AAAGCTTATC AGTGAATTGT TAGAACTCTC GCGGGTCAAG
CTCAGCACTA ACGAAACCAA AGTGCATTTA GGCTTGGCAG AATCCCTGAG CCAAGTTTTA
GACGATGCGG AATTTGAAGC AGAACAGCAA GGTAAAAGCA TTACTATCGA TATCGATGAA
GAAATTGAGT TAGCGCATTT TCCTAAATCA CTTTCCCGCG CGATTGAAAA TCTGCTGCGT
AATGCAATTC GCTATGCCGC AAGCGACATT CAGTTACAGG CAAGTGCAAC AGCTGATCAA
GTAAAAATCA CGATAAAAGA CGATGGACCA GGCATAGATG CCGCCGAACT CGATGCCATT
TTCAAACCCT TCTATCGCCC TGACTCTGCA CGGCAAAGAG AAAGCGGTGG CTGGGGACTT
GGGCTGGCAA TCACTGAAGC GGCGATTACC GCCCACAAGG GTAAGATTAA AGCCGAGAAC
CGTATCCCAA CTGGACTTGA AGTGACGATC ACGCTGCCGA GGTAG
 
Protein sequence
MAVSTVPNRL FIKLLLGFWL CSSLIIALVG LLPLLQQSHD RAPLPPHLEK VLSTIAKRIQ 
ENPALLESDF LRRWERHRDM EGKPLRVYLV NSQGQVVNTH RVSRGVRSFM LMADEEKQPI
SHQFKDELVF GPFQFNLGAE TYSLYGRLPD NHPRPWFFFF AENKLLTLSL AIFLSGLLCG
LLAWHLGKAL NSLKKSANAL AEGDLSNRVD KSTTQRNDEI GQLATAFNSM ADSIEAMVNN
QQRLMGDISH ELRTPLTRLQ LSLALARKKG QQTAETERIG YEAEQLEKLI SELLELSRVK
LSTNETKVHL GLAESLSQVL DDAEFEAEQQ GKSITIDIDE EIELAHFPKS LSRAIENLLR
NAIRYAASDI QLQASATADQ VKITIKDDGP GIDAAELDAI FKPFYRPDSA RQRESGGWGL
GLAITEAAIT AHKGKIKAEN RIPTGLEVTI TLPR