Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0260 |
Symbol | |
ID | 5751970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 299628 |
End bp | 300992 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641286519 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001552702 |
Protein GI | 160873386 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.018475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTAT CGACTGTGCC TAATCGTTTA TTTATCAAAT TATTGCTCGG ATTCTGGCTC TGCAGCTCGC TGATCATTGC CTTGGTCGGT CTGTTGCCAT TGCTGCAACA GAGCCACGAT CGTGCACCAC TGCCACCTCA CCTTGAAAAA GTCCTATCGA CTATAGCTAA GCGCATTCAA GAAAACCCCG CCTTACTGGA GTCTGATTTT CTTCGCCGCT GGGAAAGACA CAGAGACATG GAAGGCAAAC CTCTGCGGGT TTATCTCGTC AACAGCCAAG GCCAAGTCGT CAACACCCAT AGGGTGAGTC GCGGTGTGCG TAGCTTTATG TTGATGGCAG ATGAAGAAAA ACAACCTATT AGCCATCAGT TTAAAGATGA GTTGGTGTTT GGTCCCTTTC AATTCAATCT GGGCGCCGAG ACGTATTCAC TCTACGGCCG TCTGCCGGAT AACCATCCGC GGCCTTGGTT CTTCTTCTTC GCCGAAAATA AGTTATTAAC TTTAAGCCTA GCGATTTTCC TGTCGGGACT ATTATGTGGC CTGCTCGCTT GGCATCTAGG TAAGGCATTA AATTCACTTA AAAAGAGTGC CAATGCCCTC GCTGAAGGTG ACTTAAGTAA CCGTGTCGAT AAGTCCACCA CTCAGCGCAA CGACGAAATT GGTCAGCTCG CCACGGCTTT TAACAGCATG GCCGACTCCA TCGAAGCTAT GGTGAATAAT CAGCAACGAC TCATGGGGGA TATTTCCCAT GAACTGCGTA CCCCATTGAC GCGACTGCAA TTATCCCTCG CCCTCGCCCG TAAAAAAGGT CAACAAACCG CCGAAACTGA ACGCATAGGT TATGAAGCCG AGCAACTCGA AAAGCTTATC AGTGAATTGT TAGAACTCTC GCGGGTCAAG CTCAGCACTA ACGAAACCAA AGTGCATTTA GGCTTGGCAG AATCCCTGAG CCAAGTTTTA GACGATGCGG AATTTGAAGC AGAACAGCAA GGTAAAAGCA TTACTATCGA TATCGATGAA GAAATTGAGT TAGCGCATTT TCCTAAATCA CTTTCCCGCG CGATTGAAAA TCTGCTGCGT AATGCAATTC GCTATGCCGC AAGCGACATT CAGTTACAGG CAAGTGCAAC AGCTGATCAA GTAAAAATCA CGATAAAAGA CGATGGACCA GGCATAGATG CCGCCGAACT CGATGCCATT TTCAAACCCT TCTATCGCCC TGACTCTGCA CGGCAAAGAG AAAGCGGTGG CTGGGGACTT GGGCTGGCAA TCACTGAAGC GGCGATTACC GCCCACAAGG GTAAGATTAA AGCCGAGAAC CGTATCCCAA CTGGACTTGA AGTGACGATC ACGCTGCCGA GGTAG
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Protein sequence | MAVSTVPNRL FIKLLLGFWL CSSLIIALVG LLPLLQQSHD RAPLPPHLEK VLSTIAKRIQ ENPALLESDF LRRWERHRDM EGKPLRVYLV NSQGQVVNTH RVSRGVRSFM LMADEEKQPI SHQFKDELVF GPFQFNLGAE TYSLYGRLPD NHPRPWFFFF AENKLLTLSL AIFLSGLLCG LLAWHLGKAL NSLKKSANAL AEGDLSNRVD KSTTQRNDEI GQLATAFNSM ADSIEAMVNN QQRLMGDISH ELRTPLTRLQ LSLALARKKG QQTAETERIG YEAEQLEKLI SELLELSRVK LSTNETKVHL GLAESLSQVL DDAEFEAEQQ GKSITIDIDE EIELAHFPKS LSRAIENLLR NAIRYAASDI QLQASATADQ VKITIKDDGP GIDAAELDAI FKPFYRPDSA RQRESGGWGL GLAITEAAIT AHKGKIKAEN RIPTGLEVTI TLPR
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