| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0252 |
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| Symbol | |
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| ID | 5751962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 290025 |
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| End bp | 291983 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641286511 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001552694 |
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| Protein GI | 160873378 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTA AACCGCATTT ACCATCGACA CAGGCGTGGT TGGCCGATTC GTGGCAGCGC
AGCATTGGCG CTGGCTTGTC TGAATTTCAG TTACCCCAAG AGCTTAGGCT CGACGCCAGC
GAACTAAAGC AGAAACATGA GCAATATCAA ATGCTCATTG CATTAGTGCA ATCCCATGCT
TTGCCCTTGT TCAATCAGTT GATGGCGCAT TCTAATAGCC GACTCTTGCT CTCCGATGCC
GAGGGTTATG TGCTTAGGCA CTGGGGCGTG AGCCGCTACT CCACAAAACT GGCGGACGTG
GCTTTGGATA TCGGGGTGAA TTGGCTCGAA CAGCACAAAG GCACCAATGC GATAGGGACG
GCACTCACCG CCAAGCAAGC CGTATCTGTA GTGGGTGAGC AGCATTTTAT TCGTCAGAAT
CGTTTTATGA GTTGCACCGC CTGCCCGATA TTTTCCCCCC AAGGTGAGAT GCTCGGGGTG
ATAGATATCA CCAGCGAGCA GCAAAGACAC ACCCAGCAGA CGCTGATGTT AGTGTCGAGT
TTGGCGCAGC AGGTCGAGAC CGCACTTTTG TGTCATCTGC CCGATAGCCA TTATCGAATC
GATTTAGCGG CGCAGCCAAA TTTACTGAAT TCGGGTTGGC AGGGCATAGT GATTGCCGAC
AGCGATGGCC GCATTGTGGG TTGTAATCCC ATGGCGAAAC AATTGCTTAA TCAAGCCAAG
GTGGGTGATA GCGTTGAGCA GTACTTAGGC GATAATTGGA GCCGTGCGGG TGGTTTTAAT
CAGCATTTAG ACTTGCATCT ACAGACTCAG CCCTTAAACA TTCCCAGCGC TAAGGGGCGA
GTTGCGATGA GCAATAAATC GCTCACTCAA CTGGGCGTGC GGTTTCGCGA TCCTCAACTT
GAGCGCGCAT GGCAACATGC CAATAAGGTG ATCACCAAGC AAATTCCGCT GTTAGTGCTT
GGTGAAACCG GCGTCGGTAA AGAGCAGTTT GTTAAAAAAC TCCACGCCCA GAGCGCGCGT
CGCACCGAGC ATTTAGTGGC GGTGAACTGC GCGGCATTGC CTGCAGAGTT AGTCGAATCT
GAACTCTTTG GTTATCAGGC GGGCGCGTTT ACTGGGGCGA ACCGCACTGG ATTTATCGGC
AAAATTCGCC AAGCCCACGG CGGTTTTTTG TTTTTAGATG AAATAGGTGA AATGCCGCTG
GCGGCACAGA GTCGTTTACT CAGGGTATTG CAGGAGCGCG AAGTGGTGCC CGTTGGCAGT
AATCAAAGTT TTAAAGTTGA TATTCAAATC ATTGCCGCGA CCCATATGGA TTTGGAGCAA
CAAGTGGCGC AGGGGCTGTT TCGACAGGAT TTATTCTATC GATTAAATGG TCTACAAGTG
CGTTTGCCTG CGCTGCGGGA GCGGCAGGAT ATCGAGCGCA TTATCCATAA ATTGCATCGT
AAACATCGCA TTGCGCCGCA GGCGATCTGC CCAGAGTTGT TAGGGCAATT AATGCTACAC
GACTGGCCCG GCAATTTGCG TGAGCTGGAT AATCTTATGC AAGTCGCGTG TTTAATGGCT
GAAGGTGATG ACACCTTAAC TTGGCAGCAT TTACCCGATT ATCTTGCACA AAAATTAGCG
TGCGATCTGT TAAAAGTGGA TCCGTTAAAT GCACAGCTGT TAAACACACT GCAGTTAAAT
GAAGAGCAGC CATTAGGTGA AGAGGTTAAA ATCGGTCAAA ACTCTGCATC ACATCCGCTG
GCTGGCAAAG TTGTGAGTGG CAAAGTTACG AGTGGCAACA CTGCGACGCT GCCAACTGCC
ACTGCGGTTC AATCGGATTC TCTCCACGAG GCGATTTATA GCAATGTGCT ACAGGCATAC
AAAGCCTCTG ATGGCAATGT GAGCCAATGC GCCAAGCGTT TGGGGATCAG CCGTAATGCC
TTGTATCGTC GATTAAAACA GATGGGACTT AAGGGTTAA
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| Protein sequence | MAVKPHLPST QAWLADSWQR SIGAGLSEFQ LPQELRLDAS ELKQKHEQYQ MLIALVQSHA
LPLFNQLMAH SNSRLLLSDA EGYVLRHWGV SRYSTKLADV ALDIGVNWLE QHKGTNAIGT
ALTAKQAVSV VGEQHFIRQN RFMSCTACPI FSPQGEMLGV IDITSEQQRH TQQTLMLVSS
LAQQVETALL CHLPDSHYRI DLAAQPNLLN SGWQGIVIAD SDGRIVGCNP MAKQLLNQAK
VGDSVEQYLG DNWSRAGGFN QHLDLHLQTQ PLNIPSAKGR VAMSNKSLTQ LGVRFRDPQL
ERAWQHANKV ITKQIPLLVL GETGVGKEQF VKKLHAQSAR RTEHLVAVNC AALPAELVES
ELFGYQAGAF TGANRTGFIG KIRQAHGGFL FLDEIGEMPL AAQSRLLRVL QEREVVPVGS
NQSFKVDIQI IAATHMDLEQ QVAQGLFRQD LFYRLNGLQV RLPALRERQD IERIIHKLHR
KHRIAPQAIC PELLGQLMLH DWPGNLRELD NLMQVACLMA EGDDTLTWQH LPDYLAQKLA
CDLLKVDPLN AQLLNTLQLN EEQPLGEEVK IGQNSASHPL AGKVVSGKVT SGNTATLPTA
TAVQSDSLHE AIYSNVLQAY KASDGNVSQC AKRLGISRNA LYRRLKQMGL KG
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