| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0233 |
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| Symbol | |
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| ID | 5751939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 267507 |
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| End bp | 268760 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641286488 |
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| Product | tetratricopeptide domain protein |
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| Protein accession | YP_001552675 |
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| Protein GI | 160873359 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000133281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.136922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TTTGGATTTT TATTGCGCTT GTTATGTTAG TCGGCCTGAT GCTGATTTGG
ATCCCGCATT TCAGACAGCA GAAGTTGCTG AAAACTGAAG AAGCCGGAGT TCGTAAACAA
ACGAACCTTG AATTGTTCAA TGAGCGCCTG GGCGTTCTTG AAAAAGAATT AAGCGAAGAG
CTACTGGATC AAGCCGAATT CGATGCATTG AAAAAAGAGC TTGAAATCAG TCTACTCCAA
GACATCAAAG AAGCGAGCGA TGATTCACTG GTCAACCAAA TCAAGCCAAA GACGATTCTA
TGGCCGTCGA TCATGTCAGT TTGTTTGATT GTTATCTCAG GCTATCTCTA TCAGCATTTA
GGTGCCTTCG AGAATATTGA AACTGCCCAA CAACCTGCCA ACCCACATGC GGGAATGGAT
ACGGCTCAAA TCATGGCGCA GCGTGTACAG ATGATGGAAG CCCAAGTGAA AGCCGAGCCA
GAGAACAGCC AAGTATGGTT CAGCTTAGGC CACGCTTATG TATCGGCAAA CCAATACGAT
AAAGGGATTG CGGCTTTCGA TAAAGTGATG GATTTAGTCG GAAAACATGC AGAATTATTA
GGTCCTAAAG CAACAGCCAT GTATTACAAA GCGGGTCAGC AAATGACACC GCAAATCAAA
GCGATCATCG ATGAGTCTTT AGCGATGGAT GCTCAAGATC CTTCAACGCT ATTACTTGTA
GGTATGGATG CCTTCTTTAC CGCTGACTAC AAGAAAGCCA TCGCCTCTTG GCAAACTATT
CTTGATAGCG ATCGTGCTGA TGTTGATCGC GCAGCCCTAA TGAATGCTAT CGAAACCGCT
AACTTACGTA TGCAGTCTGA AACGGCTGGC ATGCCAAATG ATGAAGCCCA CAAGCAAGTG
AAGGCGAGTG CGACTAAGTC TGTCAATGTG ACTATATCTA TCTCTGCAGA ACTTGCCGCT
AAAGCCAGTC CTGAAGATAC TATCTTTATC TTTGCCCGTG CAACTGAAGG ACCAAAAGTC
CCATTAGCGG CGACCAAAGT CAGTGCTAAG TCGCTCCCAA TTACGGTGAC ATTAGATGAC
AGCAGCGGTA TGGGTGGTGA TAAGAAGTTG AGTGACGCTA CCAATGTGGA AGTGATTGCT
GTGCTTTCTA AACACGGTAA TATCAAACCA CAAACTGGCG ATCTTCAAGG TAAGATCAGC
ACAGTCGCTG TCGGCGATAC CGCCAACCTA GTACTTGATA CCCAAGTGCA ATAA
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| Protein sequence | MTTFWIFIAL VMLVGLMLIW IPHFRQQKLL KTEEAGVRKQ TNLELFNERL GVLEKELSEE
LLDQAEFDAL KKELEISLLQ DIKEASDDSL VNQIKPKTIL WPSIMSVCLI VISGYLYQHL
GAFENIETAQ QPANPHAGMD TAQIMAQRVQ MMEAQVKAEP ENSQVWFSLG HAYVSANQYD
KGIAAFDKVM DLVGKHAELL GPKATAMYYK AGQQMTPQIK AIIDESLAMD AQDPSTLLLV
GMDAFFTADY KKAIASWQTI LDSDRADVDR AALMNAIETA NLRMQSETAG MPNDEAHKQV
KASATKSVNV TISISAELAA KASPEDTIFI FARATEGPKV PLAATKVSAK SLPITVTLDD
SSGMGGDKKL SDATNVEVIA VLSKHGNIKP QTGDLQGKIS TVAVGDTANL VLDTQVQ
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