Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0218 |
Symbol | rpmD |
ID | 5751924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 257755 |
End bp | 257937 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641286473 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001552660 |
Protein GI | 160873344 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000314653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000935583 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACTA AAACTGTAAA AGTTACTCAA ACTAAAAGCG GTATCGGTCG TTTACCGAAG CACCGTGCAA CCCTAACGGG TCTTGGTTTG CGTCGCATTG GTCACACTGT TGAATTAGAA GATACTCCTT CAGTTCGCGG TATGATCAAC AAGGTCTACT ACATGGTTAA GGTGGAGGAT TAA
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Protein sequence | MATKTVKVTQ TKSGIGRLPK HRATLTGLGL RRIGHTVELE DTPSVRGMIN KVYYMVKVED
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