Gene Sbal195_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0158 
Symbol 
ID5751855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp187147 
End bp187515 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content48% 
IMG OID641286404 
Productgeneral secretion pathway protein I 
Protein accessionYP_001552600 
Protein GI160873284 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0506331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG CTAAGGGCAT GACGTTACTC GAAGTGATTG TGGCCCTTGC CGTTTTTTCG 
ATTGCGGCTG TGTCGATCAC TAAAAGTTTG GGCGAGCAGA TGGCCAACAT GCCAATTCTG
GAATCGCGTA CTTTGGCACA GTGGGTGGCC GATAATCAGA TGGTCGATGC CAGACTCGAG
CCGCAGTTTC CTGACATCGG TAAAAAAGAA GGCCAAGTCG AACTTGCAGG AAAGGATTGG
TATTGGCGTA AAGAAGTGGT GAAAACCACG GACGATAATT TTCGCATGAT CCGGATTAGC
GTGAGTGAAG ACGAACGATA TCAGCGTATT GCAGCACAAG TGAGCAGTTA TGTCCTTAAA
ACTGACTAG
 
Protein sequence
MKRAKGMTLL EVIVALAVFS IAAVSITKSL GEQMANMPIL ESRTLAQWVA DNQMVDARLE 
PQFPDIGKKE GQVELAGKDW YWRKEVVKTT DDNFRMIRIS VSEDERYQRI AAQVSSYVLK
TD