| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0155 |
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| Symbol | |
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| ID | 5751852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 184862 |
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| End bp | 186085 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641286401 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001552597 |
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| Protein GI | 160873281 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0573694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAT TTGAATATAA GGCACTGGAT GCCAAGGGAA AGCAGCTTAA GGGCGTAATC
GAGGCGGATA CCGCCAGACA CGCCCGTAGC CAGTTGCGCG ATCAGCGCAT GATGCCCTTG
GAAATTCTGC CTGTTTCCGA AAAAGAAGCC AAAGCTAAGA GCAGCAGCTT TTCGTTTTTC
AAACGGGGTA TCTCGGTCGC TGAGTTAGCC TTGATCACCC GTCAAATCGC GACCTTAGTG
GCCGCGGGTT TACCGATTGA AGAATCCCTT AAAGCCGTTG GTCAGCAATG CGAGAAAGAT
CGTCTTGCGA GTATGATCAT GGCGGTACGT TCGCGGGTGG TTGAAGGTTA CAGTCTGGCC
GACTCCTTGG CCGAATTTCC GCACATTTTC GATGACTTAT ATCGTGCCAT GGTGGCCTCG
GGTGAAAAGT CCGGTCATTT AGAAGTAGTG CTTAATCGGT TGGCGGATTA CACAGAGCGA
CGCCAACAGC TTAAATCTAA GCTGACTCAA GCCATGATTT ATCCTGCGGT ATTGACCACA
GTAGCGATTG GGGTGATTTC CATCCTGCTG GCGGCGGTTG TACCTAAGGT GGTTGGGCAG
TTTGAACACA TGGGCGCCGA GTTACCGGCT TCGACACGCT TCTTGATTTC GGCCTCTGAC
TTTGTACAAA ACTACGGTGT GTTTGTGGTC ATTGCCCTGG TGATGCTGTT CGCACTCTTT
CGTCGCATGT TAAAGTCGCC TGCGTTTCGG ATGAAGTACG ACAATTTTTT ATTGAGCATG
CCGGTTGTGG GCCGCGTGAG TAAGGGCTTA AATACGGCAC GTTTTGCGCG AACCTTAAGT
ATCTTATCCG CAAGCTCTGT GCCTTTGCTC GACGGTATGC GTATCGCCAG TGAAGTGTTG
CAGAATGTGC GAGTGCGGGC TGCAGTGGAT GATGCGACTG CGCGGGTGCG TGAAGGAACT
AGCCTAGGTG CGGCATTGAC TAATACTAAG TTGTTTCCGG CAATGATGTT ATACATGATT
GCCTCGGGCG AAAAGAGTGG TCAGCTTGAG CAAATGTTAG AACGCGCCGC CGATAACCAA
GACAGGGAAT TCGAGGGCAA CGTCAATATA GCGTTAGGGG TATTTGAACC TATGCTGGTG
GTGAGTATGG CGTGTGTGGT GCTGTTTATC GTGATGGCGA TTCTGCAGCC AATCTTAGCC
TTGAATAACT TGATTAGCGG TTAA
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| Protein sequence | MPAFEYKALD AKGKQLKGVI EADTARHARS QLRDQRMMPL EILPVSEKEA KAKSSSFSFF
KRGISVAELA LITRQIATLV AAGLPIEESL KAVGQQCEKD RLASMIMAVR SRVVEGYSLA
DSLAEFPHIF DDLYRAMVAS GEKSGHLEVV LNRLADYTER RQQLKSKLTQ AMIYPAVLTT
VAIGVISILL AAVVPKVVGQ FEHMGAELPA STRFLISASD FVQNYGVFVV IALVMLFALF
RRMLKSPAFR MKYDNFLLSM PVVGRVSKGL NTARFARTLS ILSASSVPLL DGMRIASEVL
QNVRVRAAVD DATARVREGT SLGAALTNTK LFPAMMLYMI ASGEKSGQLE QMLERAADNQ
DREFEGNVNI ALGVFEPMLV VSMACVVLFI VMAILQPILA LNNLISG
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