| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0152 |
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| Symbol | |
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| ID | 5751849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 180229 |
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| End bp | 181158 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641286398 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_001552594 |
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| Protein GI | 160873278 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.30752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.16929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAT TAGATAAAGT TATCGCAAAA GCCATTGGCA TGCCCCATAA ACCCCTAAGC
CGGATTGTCT TCTGGTTGGG CTTTATTGTG ATCATGTTGT TAGCTGCGCA AATTACATGG
AAATTAGTGC CTACTAGCTC ATCAGCCAGT GCTTGGTCAC CAACGCCCGT AAGCGTGAAT
GGCAAAGGTG CCGGTCAGGT TGATCTCGCA GGTCTGCAGC AGCTTGGACT CTTTGGTAAG
GCGGATGCGA CATCTGATAA ACCTAAAGTC GAAGCAGTCG AGACTGTGAC TGACGCACCT
AAGACTACAC TCTCTATTCA GCTGACTGGG GTTGTCGCAT CGACAGCGGA CCAAAAAGGC
CTCGCAATTA TTGAGTCAAA CGGCAGCCAA GATACTTATA GCCTCGGCGA TAAAATTAAG
GGCACATCTG CATCACTCAA AGAAGTCTAT GCCGACCGTA TCATCATCAC TAACGCTGGC
CGTTACGAGA CCTTAATGCT CGATGGCTTA GTGTACACCA GCCAAAGCCC AGCCAATCAG
CAGTTACAAC AAGCTAAGAG TAATAAGGCC GGCTCGGCAG TGAGCCGTGT TGATCAACGT
AACAATGCCG ATATTTCCCA AGAACTCGCC GAATCCCGCA CCGAATTGTT AGCCGACCCG
AGCAAGATCA CCGATTACAT TGCCATTTCA CCTGTGAGAC AGGGTGATTC TGTGGCGGGT
TATCGTTTGA ATCCGGGTAA AGACGCCAAT TTGTTCAAGC AGGCGGGTTT TAAAGCCAAT
GATTTAGCCA AATCGATTAA TGGATACGAC TTGACCGTAA TGAGTCAGGC GTTAGAAATG
ATGAGCCAAT TATCCGAGTT AACCGAAGTA TCAATTATGG TTGAACGGGA AGGACAATTG
GTTGAAATCA TGTTTAGTTT GCCGCAATAA
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| Protein sequence | MDLLDKVIAK AIGMPHKPLS RIVFWLGFIV IMLLAAQITW KLVPTSSSAS AWSPTPVSVN
GKGAGQVDLA GLQQLGLFGK ADATSDKPKV EAVETVTDAP KTTLSIQLTG VVASTADQKG
LAIIESNGSQ DTYSLGDKIK GTSASLKEVY ADRIIITNAG RYETLMLDGL VYTSQSPANQ
QLQQAKSNKA GSAVSRVDQR NNADISQELA ESRTELLADP SKITDYIAIS PVRQGDSVAG
YRLNPGKDAN LFKQAGFKAN DLAKSINGYD LTVMSQALEM MSQLSELTEV SIMVEREGQL
VEIMFSLPQ
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