Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0072 |
Symbol | |
ID | 5751768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 89415 |
End bp | 91697 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641286317 |
Product | penicillin-binding protein 1C |
Protein accession | YP_001552514 |
Protein GI | 160873198 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCCG TTTATCTAGC CTTAGTCGCC CTAGCCGTCA TATTGCTAGG GCTTAGACTT TGGCCCGCGC AGCCATTGAG TCAACTGATG CCCAGCTCAC GTGAGGTGTT GGCTGCCGAT GGCTCTTTAA TGCGCCTGAC CTTAGCCACT GATGGCCAAT ATCGACTCTG GCAAGATTTA GAGGATATCT CCCCCATCAT GATTAAGGTC ATGCTGTTAA AGGAAGATCG CTATTTCTAT TATCACCCAG GTGTTAATCC AGTCGCATTA GTACGTGCCA TATTAGCCAC TTATGTTGGC GGTGATCGTC AAGGTGCCTC GACTCTGACT ATGCAGTTAG TTCGTCGAGT CTATGCCATT AACAGTCGCA CTGTGTCGGG CAAATTAGAG CAGATCTTGG CGGCATTCTG GTTAGAGGCT CGTTATAGCA AGCATGAGCT ATTAGAGGCT TATCTTAACC TCGCTCCCAT GGGGGGCAAT ATCGAAGGGG TTGGTGCTGC AAGTCAGATT TATTTCCATA AAATCGCGGG TGAGTTGTCT TTGAGCGAAG CCTTGAGCTT AGCGGTTATG CCTCAGAGTC CGGCGCGTCG GGCTCGGTTT CAGGCAGACT TTCAAGCGGC AAGGGATAGG CTGGCGCTAT TTTGGCAGCA GACCTATCCA GATGATCCTC GTAATCAAGG CTTGCTGGTG TTGACGGCCC TAGGTGCTGA ACGCAACGAG CTGCCTTTTA AGGCGCCCCA TTTTACGCGT CGACAACTAC GCCAAGACGC GACCATTATT CACACGACAA TAGAGCCTAA ATTACAAACG CTGCTTGAAC TGCGAATTCG TCAGTATGTT GCGGGTAAGC GCCATTTAGG CGTGAATAAT GCCACAGCGC TATTGATCGA TACCCGTGAT CAGGCGATTA AGGCTTGGGT GGGGTCAGCT GATTTTTTCA ATCCCATGAT TTATGGTCAG GTTGATGGTG TTGTCGCCCG CAGATCCCCG GGTTCGACTC TGAAACCCTT TCTCTATGCG TTAGGTTTAG ATCAAGGAAT TATTCATCCC CAAAGTATCA TTAAAGATGC GCCTACTGCT TTTGGGAGTT TTGAACCGGA GAATTTCGAC CATCGCTTCA CGGGCCCTAT TAGTGCCCAT GATGCTTTGA TCAAGAGCCG CAATCTACCT GCAGTGTGGT TGGCCGGACA GTTGACTCGT CCTAATTTGT ACGGCTTTTT ACGACAAGCC CAGATACTTG GCCTAAGGGG AGAAAGCCAT TATGGGCTAG CACTTGCCTT AGGGGGTGGC GAGTTGACTA TGATGGAACT TGGCAGACTC TACCTAATGC TAGCGAGTGA GGGACGTTAT TATCCCTTAC GGGAGAGGAC AGATCAGCCC ATTAATCCGC CGAGCACTCA GTTATTGAGT CAAGCTGCGA GCTTTCTTGT GTTGGATATG CTTAAAGACA ATCCGCGCGC CGATGGTTTA CCTAAGCAGG GCTGGCGTGT GGCTTGGAAG ACGGGCACCT CTTGGGGATT CCATGATGCT TGGAGCGCTG GCGTCGCTGG CCCCTATGTA TTGGTGGTCT GGGTAGGGAA TTTCGATGCA ACGCCGAATG CTGCTTTTAT TGGTGCTGAA ATAGCTGGGC CATTATTTTT TAACATCAGT GATGCTTTGC AGGCAAGTCT GCCGAGTACC GCCGATAAAG CCTTAGCTCA ACCCAGTACA GTGAAAAAAG TGAACATTTG CGCCGAGTCA GGTGAGTTGC CTAACCTGTG GTGCCCTAAA GTGGTTGAGG GTTGGTTTAT TCCCGGTGTT TCACCCGTCA AAGTGTCTAC GCTACATCGT CCCGTTTGGG TCGATAATCA AACGGGTATG GCTGTGTGCC CACCCTATGA TGCTCACACC CAGCACCAAG AAGTCTTCGC TTTCTGGCCT TCGGACATGG CGAGTTTATT TGAGCAGGCG GGGCTACCGC GCAAGTTGGC ACCACAGTTG CCCGAATCGT GTCGTAACAC TATTCAGCTC ACTAACATAG ATCCTGTTAT TCGCTCCCCC CTGAGAAATG TCACTTATAG CTTGAGGCAA AGTCATTTAA ATGAACATAT TGCATTGAAG GCCGATGCCG CATCCGACGC GAGTATGTTG TACTGGTTTG TTGGGCGGGA TCTCATCGGC CAAAGCTTAC CGAAACAGAC CTTAGAGTGG CGGCCCTCGA CGGCGGGTGA CTATAAGTTA TCAGTCACTG ACGACAAGGG TCGCAGTGCG AGTTTGAATC TTAATGTTAG CATCTTGCAG TAA
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Protein sequence | MRSVYLALVA LAVILLGLRL WPAQPLSQLM PSSREVLAAD GSLMRLTLAT DGQYRLWQDL EDISPIMIKV MLLKEDRYFY YHPGVNPVAL VRAILATYVG GDRQGASTLT MQLVRRVYAI NSRTVSGKLE QILAAFWLEA RYSKHELLEA YLNLAPMGGN IEGVGAASQI YFHKIAGELS LSEALSLAVM PQSPARRARF QADFQAARDR LALFWQQTYP DDPRNQGLLV LTALGAERNE LPFKAPHFTR RQLRQDATII HTTIEPKLQT LLELRIRQYV AGKRHLGVNN ATALLIDTRD QAIKAWVGSA DFFNPMIYGQ VDGVVARRSP GSTLKPFLYA LGLDQGIIHP QSIIKDAPTA FGSFEPENFD HRFTGPISAH DALIKSRNLP AVWLAGQLTR PNLYGFLRQA QILGLRGESH YGLALALGGG ELTMMELGRL YLMLASEGRY YPLRERTDQP INPPSTQLLS QAASFLVLDM LKDNPRADGL PKQGWRVAWK TGTSWGFHDA WSAGVAGPYV LVVWVGNFDA TPNAAFIGAE IAGPLFFNIS DALQASLPST ADKALAQPST VKKVNICAES GELPNLWCPK VVEGWFIPGV SPVKVSTLHR PVWVDNQTGM AVCPPYDAHT QHQEVFAFWP SDMASLFEQA GLPRKLAPQL PESCRNTIQL TNIDPVIRSP LRNVTYSLRQ SHLNEHIALK ADAASDASML YWFVGRDLIG QSLPKQTLEW RPSTAGDYKL SVTDDKGRSA SLNLNVSILQ
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