Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4930 |
Symbol | deoB |
ID | 6269526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4595022 |
End bp | 4596245 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641728656 |
Product | phosphopentomutase |
Protein accession | YP_001883047 |
Protein GI | 187733571 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTG CATTTATTAT GGTGCTGGAC TCATTCGGCA TCGGCGCTAC AGAAGATGCA GAACGCTTTG GTGACGTCGG GGCTGACACC CTGGGTCATA TCGCAGAAGC TTGTGCCAAA GGCGAAGCTG ATAACGGTCG TAAAGGCCCG CTCAATCTGC CAAATCTGAC CCGTCTGGGG CTGGCGAAAG CACACGAAGG TTCTACCGGT TTCATTCCGG CGGGAATGGA CGGCAACGCT GAAGTTATCG GCGCGTACGC ATGGGCGCAC GAAATGTCAT CCGGTAAAGA TACCCCGTCT GGTCACTGGG AAATCGCCGG TGTCCCGGTT CTGTTTGAGT GGGGATACTT CTCCGATCAC GAAAACAGCT TCCCGCAAGA GCTGCTGGAT AAACTGGTCG AACGCGCTAA TCTGCCGGGT TACCTCGGTA ACTGCCACTC TTCCGGTACG GTCATTCTGG ATCAGCTGGG CGAAGAGCAC ATGAAAACCG GCAAGCCGAT TTTCTATACC TCCGCTGACT CCGTGTTCCA GATTGCCTGC CACGAAGAAA CCTTTGGCCT GGATAAACTC TACGAACTGT GCGAAATCGC CCGTGAAGAG CTGACCAACG GCGGCTACAA CATCGGTCGT GTTATCGCTC GTCCGTTTAT CGGTGACAAA GCCGGTAACT TCCAGCGTAC CGGTAACCGT CACGACCTGG CTGTTGAGCC GCCAGCACCG ACCGTGCTGC AGAAACTGGT TGATGAAAAA CACGGTCAGG TGGTTTCTGT CGGTAAAATT GCAGACATCT ACGCCAACTG CGGTATCACC AAGAAAGTGA AAGCAACTGG CCTGGACGCG CTGTTTGACG CCACCATCAA AGAGATGAAA GAAGCGGGTG ATAACACCAT CGTCTTCACC AACTTCGTTG ACTTCGACTC TTCCTGGGGC CACCGTCGCG ACGTCGCCGG TTATGCTGCG GGTCTGGAGC TGTTCGACCG CCGTCTGCCG GAGCTGATGT CTTTGCTGCG CGATGACGAC ATCCTGATCC TCACTGCTGA CCACGGTTGT GATCCGACCT GGACCGGTAC TGACCACACG CGTGAACACA TTCCGGTACT GGTTTACGGC CCGAAAGTAA AACCGGGTTC ACTGGGTCAC CGTGAAACCT TCGCGGATAT CGGCCAGACT CTGGCAAAAT ATTTTGGTAC TTCTGATATG GAATATGGCA AAGCCATGTT CTGA
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Protein sequence | MKRAFIMVLD SFGIGATEDA ERFGDVGADT LGHIAEACAK GEADNGRKGP LNLPNLTRLG LAKAHEGSTG FIPAGMDGNA EVIGAYAWAH EMSSGKDTPS GHWEIAGVPV LFEWGYFSDH ENSFPQELLD KLVERANLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC HEETFGLDKL YELCEIAREE LTNGGYNIGR VIARPFIGDK AGNFQRTGNR HDLAVEPPAP TVLQKLVDEK HGQVVSVGKI ADIYANCGIT KKVKATGLDA LFDATIKEMK EAGDNTIVFT NFVDFDSSWG HRRDVAGYAA GLELFDRRLP ELMSLLRDDD ILILTADHGC DPTWTGTDHT REHIPVLVYG PKVKPGSLGH RETFADIGQT LAKYFGTSDM EYGKAMF
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