| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4749 |
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| Symbol | cycA |
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| ID | 6270296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4432747 |
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| End bp | 4434159 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641728506 |
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| Product | D-alanine/D-serine/glycine permease |
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| Protein accession | YP_001882901 |
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| Protein GI | 187731057 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000228678 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGATC AGGTAAAAGT CGTTGCCGAT GATCAGGCTC CGGCTGAACA GTCGCTACGG
CGCAATCTCA CAAACCGACA TATTCAGCTT ATTGCCATTG GCGGTGCCAT TGGTACGGGG
TTGTTTATGG GGTCTGGCAA AACGATTAGC CTTGCCGGGC CGTCGATCAT TTTCGTTTAT
ATGATCATTG GTTTTATGCT CTTTTTCGTG ATGCGGGCAA TGGGGGAATT GCTGCTTTCG
AATCTGGAAT ACAAATCTTT TAGTGACTTC GCTTCCGATT TACTCGGGCC GTGGGCAGGA
TATTTCACTG GCTGGACTTA CTGGTTCTGC TGGGTTGTAA CCGGTATGGC AGACGTGGTG
GCGATCACGG CTTATGCTCA GTTCTGGTTC CCCGATCTCT CCGACTGGGT CGCCTCGCTG
GCGGTGATAG TGCTGCTGCT GACGCTCAAC CTTGCCACCG TGAAAATGTT CGGTGAGATG
GAGTTCTGGT TTGCGATGAT CAAAATCGTC GCCATCGTGT CGCTGATTAT CGTCGGCCTG
GTCATGGTGG CGATGCACTT TCAGTCACCG ACTGGTGTGG AAGCGTCATT CGCGCATTTG
TGGAATGACG GCGGCTGGTT CCCGAAAGGT TTAAGTGGCT TCTTTGCCGG ATTCCAGATA
GCGGTTTTCG CTTTCGTGGG GATTGAGCTG GTAGGTACAA CAGCTGCGGA AACCAAAGAT
CCGGAGAAAT CACTGCCACG CGCGATTAAC TCCATTCCGA TCCGTATCAT TATGTTCTAC
GTCTTCGCGC TGATTGTGAT TATGTCCGTG ACACCGTGGA GTTCGGTAGT CCCGGAGAAA
AGCCCGTTCG TTGAGCTGTT TGTGTTGGTA GGTTTGCCTG CGGCTGCCAG CGTGATCAAC
TTTGTGGTGC TGACCTCTGC GGCGTCTTCC GCTAACAGCG GCGTCTTCTC TACCAGCCGT
ATGCTGTTTG GTCTGGCGCA GGAAGGTGTG GCACCGAAAG CGTTCGCTAA ACTTTCTAAG
CGCGCAGTAC CAGCGAAAGG GCTGACCTTC TCCTGCATCT GCCTGCTCGG TGGCGTGGTG
ATGCAGTATG TGAATCCTAG CGTGATTGGT GCGTTCACGA TGATTACAAC CGTTTCCGCG
ATTCTGTTTA TGTTCGTCTG GACGATTATC CTTTGCTCGT ACCTGGTGTA CCGCAAACAG
CGTCCTCATC TGCATGAGAA GTCGATCTAC AAGATGCCGC TCGGCAAGCT GATGTGCTGG
GTATGTATGG CGTTCTTTGT GTTCGTGGTC GTGTTGCTGA CACTGGAAGA TGACACTCGC
CAGGCGCTGC TGGTTACCCC GCTGTGGTTT ATCGCACTGG GGCTGGGCTG GTTGTTTATT
GGTAAGAAGC GGGCTGCTGA ACTGCGGAAA TAA
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| Protein sequence | MVDQVKVVAD DQAPAEQSLR RNLTNRHIQL IAIGGAIGTG LFMGSGKTIS LAGPSIIFVY
MIIGFMLFFV MRAMGELLLS NLEYKSFSDF ASDLLGPWAG YFTGWTYWFC WVVTGMADVV
AITAYAQFWF PDLSDWVASL AVIVLLLTLN LATVKMFGEM EFWFAMIKIV AIVSLIIVGL
VMVAMHFQSP TGVEASFAHL WNDGGWFPKG LSGFFAGFQI AVFAFVGIEL VGTTAAETKD
PEKSLPRAIN SIPIRIIMFY VFALIVIMSV TPWSSVVPEK SPFVELFVLV GLPAAASVIN
FVVLTSAASS ANSGVFSTSR MLFGLAQEGV APKAFAKLSK RAVPAKGLTF SCICLLGGVV
MQYVNPSVIG AFTMITTVSA ILFMFVWTII LCSYLVYRKQ RPHLHEKSIY KMPLGKLMCW
VCMAFFVFVV VLLTLEDDTR QALLVTPLWF IALGLGWLFI GKKRAAELRK
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