Gene SbBS512_E4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4657 
Symbol 
ID6270939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4353319 
End bp4354137 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID641728422 
ProductISSd1, transposase orfB 
Protein accessionYP_001882820 
Protein GI187730601 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.326182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCAGG TATTTGGTGT ATCCAGGAGC GGTTATTACA ACTGGGTACA GCATGAACCC 
TCAGACAGAA AACAAAGTGA TGAGCGGCTA AAACTGGAGA TTAAGGTGGC ACATATCCGC
ACTCGCGAAA CATATGGAAC CCGGCGGCTC CAGACGGAGC TGGCAGAGAA TGGCATCATC
GTTGGTCGTG ACCGACTGGC ACGTCTTCGT AAGGAGCTAA GGCTACGCTG TAAGCAGAAA
CGCAAGTTCA GAGCGACTAC GAACCCGAAC CACAATCTGC CAGTTGCGCC AAATCTGCTG
AACCAGACGT TCGCTCCTAC AGCACCAAAT CAGGTCTGGG TGGCGGACCT GACGTATGTT
GCCACACAGG AGGGATGGTT GTACCTCGCT GGCATCAAAG ATGTTTATAC GTGCGAAATT
GTCGGCTACG CCATGGGAGA GCGCATGACA AAAGAGCTGA CAGGTAAAGC CCTGTTTATG
GCGCTCAGGA GCCAGCGCCC ACCTGCCGGG CTAATCCACC ACTCTGATCG AGGTTCACAG
TACTGCGCAT ACGATTACCG GGTCATACAG GAGCAGTCTG GTCTGAAAAC ATCAATGTCG
CGTAAAGGTC ACTGTTACGA CAACGCTCCG ATGGAAAGCT TCTGGGGAAC GCTGAAAAAT
GAGAGCCTGA GCCACTATCG TTTTAATAAC CGGGATGAAG CCATCTCAGT AATACGGGAA
TACATTGAGA TTTTCTACAA TCGTCAGCGT CGTCACTCTC GTCTGGGGAA TATCTCCCCG
GCAGCCTTCA GGGAAAAATA TCATCAGATG GCTGCTTAA
 
Protein sequence
MCQVFGVSRS GYYNWVQHEP SDRKQSDERL KLEIKVAHIR TRETYGTRRL QTELAENGII 
VGRDRLARLR KELRLRCKQK RKFRATTNPN HNLPVAPNLL NQTFAPTAPN QVWVADLTYV
ATQEGWLYLA GIKDVYTCEI VGYAMGERMT KELTGKALFM ALRSQRPPAG LIHHSDRGSQ
YCAYDYRVIQ EQSGLKTSMS RKGHCYDNAP MESFWGTLKN ESLSHYRFNN RDEAISVIRE
YIEIFYNRQR RHSRLGNISP AAFREKYHQM AA