| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4517 |
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| Symbol | |
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| ID | 6272866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4226443 |
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| End bp | 4227597 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641728305 |
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| Product | PTS system, mannose/fructose/sorbose family, IID component |
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| Protein accession | YP_001882703 |
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| Protein GI | 187732311 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA GAAAAATTAC ACGCAGCGAT CTGGTGAGCA TGTTTCTGCG CTCCAACCTG
CAACAGGCGT CCTTTAACTT TGAACGTATT CACGGGCTGG GTTTTTGCTA CGACATGATC
CCCGCCATCA AACGACTTTA CCCATTAAAA GAGGATCAGG TTGCGGCGCT CAGGCGACAC
CTGGTGTTCT TCAATACCAC GCCAGCCGTA TGTGGCCCGG TCATCGGCGT CACTGCCGCC
ATGGAAGAGG CGCGGGCCAA CGGCGCGGAA ATTGATGACG GTACCATTAA CGGCATCAAA
GTCGGTCTGA TGGGACTATT GGCAGGAGTT GGCGATCCAC TGGTCTGGGG AACGCTGCGC
CCGATTACCA CCGCGCTCGG CGCATCTCTG GCACTTTCGG GCAACATTCT CGGCCCGCTG
CTGTTCTTCT TTATTTTCAA TGCGGTGCGT CTGGCGATGA AGTGGTATGG CCTACAGCTC
GGCTTTCGCA AAGGGGTGAA TATCGTCAGC GATATGGGCG GGAATGTGCT GCAAAAACTC
ACCGAAGGCG CGTCGATTCT CGGGCTGTTT GTGATGGGCG TGCTGGTCAC CAAATGGACG
TCAATCAACG TACCGTTGGT GGTTTCACAA ACGCATGCCG CCGATGGCTC CACCGTCACC
ATGACCGTGC AGAACATTCT CGACCAACTT TGCCCTGGTT TGCTGGCGCT CGGTCTGACG
CTGCTTATGG TTCGTCTGCT CAACAAAAAA ATTAACCCGG TATGGCTGAT TTTCGCCCTG
TTTGGCTTAG GGATTATCGG TAATGCGCTG GGCTTCCTGT CCAGATTCTT CGCCCCGGCA
CGACTGCCGG GGCCATCGCT CAACATGAGG TGGTTTATGA AAACAACAGC TCTGCGTCTT
TATGGTAAAC GTGATTTACG CCTGGAAACC TTTGACCTTC CTGAAATGCA GGAGGATGAA
ATCCTCGCGA CGGTGGTCAC TGACAGCCTG TGCCTCTCTT CCTGGAAAGA GGCCAATCTG
GGTGAAAACC ATAAAAAAGT ACCCGACGAT GTGGCGCCCC CCCCCCCATC ATCATCGGCC
ACGAGTTTTG CGGCGATATT CTGGCCGTGG GTAAAAAGTG GCAGCACAAA TTCCAGCCGG
GTCAGCGTTA TGTGA
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| Protein sequence | MEQRKITRSD LVSMFLRSNL QQASFNFERI HGLGFCYDMI PAIKRLYPLK EDQVAALRRH
LVFFNTTPAV CGPVIGVTAA MEEARANGAE IDDGTINGIK VGLMGLLAGV GDPLVWGTLR
PITTALGASL ALSGNILGPL LFFFIFNAVR LAMKWYGLQL GFRKGVNIVS DMGGNVLQKL
TEGASILGLF VMGVLVTKWT SINVPLVVSQ THAADGSTVT MTVQNILDQL CPGLLALGLT
LLMVRLLNKK INPVWLIFAL FGLGIIGNAL GFLSRFFAPA RLPGPSLNMR WFMKTTALRL
YGKRDLRLET FDLPEMQEDE ILATVVTDSL CLSSWKEANL GENHKKVPDD VAPPPPSSSA
TSFAAIFWPW VKSGSTNSSR VSVM
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