| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4491 |
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| Symbol | hupA |
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| ID | 6270771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4201138 |
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| End bp | 4201410 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641728284 |
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| Product | transcriptional regulator HU subunit alpha |
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| Protein accession | YP_001882686 |
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| Protein GI | 187733664 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0852675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAGA CTCAACTGAT TGATGTAATT GCAGAGAAAG CAGAACTGTC CAAAACCCAG
GCTAAAGCTG CTCTGGAGTC CACTCTGGCT GCAATTACTG AGTCTCTGAA AGAAGGCGAT
GCTGTACAAC TGGTTGGTTT CGGTACCTTC AAAGTGAACC ACCGCGCTGA GCGTACTGGC
CGCAACCCGC AGACCGGTAA AGAAATCAAA ATTGCCGCAG CTAACGTACC GGCATTTGTT
TCTGGCAAGG CACTGAAAGA CGCAGTTAAG TAA
|
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| Protein sequence | MNKTQLIDVI AEKAELSKTQ AKAALESTLA AITESLKEGD AVQLVGFGTF KVNHRAERTG
RNPQTGKEIK IAAANVPAFV SGKALKDAVK
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