Gene SbBS512_E4391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4391 
SymbolcpxA 
ID6270358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4098430 
End bp4099803 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content55% 
IMG OID641728192 
Producttwo-component sensor protein 
Protein accessionYP_001882605 
Protein GI187731633 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGCA GCTTAACCGC GCGCATCTTC GCCATCTTCT GGCTGACGCT GGCGCTGGTG 
TTGATGTTGG TTTTGATGTT ACCCAAGCTC GATTCACGCC AGATGACCGA GCTTCTGGAT
AGCGAACAGC GTCAGGGGCT GATGATTGAG CAGCATGTCG AAGCGGAGCT GGCGAACGAT
CCGCCCAACG ATTTAATGTG GTGGCGGCGT CTGTTCCGGG CGATTGATAA GTGGGCACCG
CCAGGACAGC GTTTGTTATT GGTGACCACC GAAGGCCGCG TGATCGGCGC TGAACGCAGC
GAAATGCAGA TCATTCGTAA CTTTATTGGT CAGGCCGATA ACGCCGATCA TCCGCAGAAG
AAAAAGTATG GCCGCGTGGA ACTGGTCGGT CCGTTCTCCG TGCGTGATGG CGAAGATAAT
TACCAACTTT ATCTGATTCG TCCGGCCAGC AGTTCTCAAT CCGATTTCAT TAACTTACTG
TTTGACCGCC CGCTATTACT GCTGATTGTC ACCATGTTGG TCAGTACGCC GCTGCTGTTG
TGGTTGGCCT GGAGTCTGGC AAAACCGGCG CGTAAGCTGA AAAACGCTGC CGATGAAGTT
GCCCAGGGAA ACTTACGCCA GCACCCGGAA CTGGAAGCGG GGCCACAGGA ATTCCTTGCC
GCAGGTGCCA GTTTTAACCA GATGGTCACC GCGCTGGAGC GCATGATGAC CTCTCAGCAG
CGTCTGCTTT CTGATATCTC TCACGAGCTG CGCACCCCGC TGACGCGTCT GCAACTGGGT
ACGGCGTTAC TGCGCCGTCG TAGCGGTGAA AGCAAGGAAC TGGAGCGTAT TGAAACCGAA
GCGCAACGTC TGGACAGCAT GATCAACGAT CTGTTGGTGA TGTCACGTAA TCAGCAAAAA
AACGCGCTGG TTAGCGAAAC CATCAAAGCC AACCAGTTGT GGAGTGACGT GCTGGATAAC
GCGGCGTTCG AAGCCGAGCA AATGGGCAAG TCGTTGACAG TTAACTTCCC GCCTGGGCCG
TGGCCGCTGT ACGGCAATCC GAACGCCCTG GAAAGTGCGC TGGAAAACAT TGTTCGTAAT
GCTCTGCGTT ATTCCCATAC GAAGATTGAA GTGGGCTTTG CGGTAGATAA AGACGGTATC
ACCATTACGG TGGACGACGA TGGTCCTGGC GTTAGCCCGG AAGATCGCGA ACAGATTTTC
CGTCCGTTCT ATCGGACCGA TGAAGCACGC GATCGTGAAT CTGGCGGTAC AGGATTGGGG
CTGGCGATTG TTGAAACCGC CATTCAGCAG CATCGTGGCT GGGTGAAGGC AGAAGACAGC
CCGCTGGGCG GTTTACGGCT GGTGATTTGG TTGCCGCTGT ATAAGCGGAG TTAA
 
Protein sequence
MIGSLTARIF AIFWLTLALV LMLVLMLPKL DSRQMTELLD SEQRQGLMIE QHVEAELAND 
PPNDLMWWRR LFRAIDKWAP PGQRLLLVTT EGRVIGAERS EMQIIRNFIG QADNADHPQK
KKYGRVELVG PFSVRDGEDN YQLYLIRPAS SSQSDFINLL FDRPLLLLIV TMLVSTPLLL
WLAWSLAKPA RKLKNAADEV AQGNLRQHPE LEAGPQEFLA AGASFNQMVT ALERMMTSQQ
RLLSDISHEL RTPLTRLQLG TALLRRRSGE SKELERIETE AQRLDSMIND LLVMSRNQQK
NALVSETIKA NQLWSDVLDN AAFEAEQMGK SLTVNFPPGP WPLYGNPNAL ESALENIVRN
ALRYSHTKIE VGFAVDKDGI TITVDDDGPG VSPEDREQIF RPFYRTDEAR DRESGGTGLG
LAIVETAIQQ HRGWVKAEDS PLGGLRLVIW LPLYKRS