Gene SbBS512_E4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4345 
SymbolglnL 
ID6269141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4059671 
End bp4060720 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content55% 
IMG OID641728154 
Productnitrogen regulation protein NR(II) 
Protein accessionYP_001882567 
Protein GI187734176 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG GCACGCAGCC CGATGCTGGG CAGATCCTCA ACTCGCTGAT TAACAGTATT 
TTGTTAATCG ATGACAACCT GGAGATCCAT TACGCCAACC CTGCCGCGCA ACAACTGCTC
GCCCAAAGCT CCCGCAAATT GTTTGGTACA CCGTTACCGG AACTGTTGAG CTACTTCTCA
TTAAATATCG AGCTGATGCA AGAAAGTCTG GAGGCGGGGC AAGGTTTTAC CGATAACGAA
GTGACGCTGG TCATCGACGG GCGCTCGCAT ATCCTTTCTG TGACGGCCCA GCGTATGCCG
GACGGCATGA TCCTGCTGGA GATGGCTCCG ATGGATAACC AGCGCCGCTT AAGTCAGGAA
CAGCTACAGC ACGCCCAGCA GGTTGCTGCC CGTGATTTAG TGCGCGGCCT GGCACATGAG
ATTAAAAATC CGCTTGGCTG TTTACGTGGC GCGGCGCAGC TGCTCAGCAA AGCGTTACCT
GACCCATCAC TACTCGAATA TACCAAAGTG ATTATCGAAC AGGCGGACCG GCTGCGAAAT
CTGGTCGACC GTCTGTTGGG GCCGCAGCTG CCCGGTACGC GCGTTACCGA AAGTATTCAC
AAAGTGGCTG AACGCGTGGT AACGCTGGTG TCGATGGAAC TGCCGGACAA CGTGCGGTTG
ATTCGTGATT ACGATCCCAG CCTGCCGGAA CTGGCGCACG ACCCGGATCA AATTGAACAG
GTCTTGCTGA ATATTGTGCG CAATGCGCTA CAGGCGCTGG GGCCGGAAGG CGGTGAAATC
ATTCTGCGTA CCCGCACCGC GTTTCAACTG ACCTTACACG GCGAGCGCTA CCGGCTGGCG
GCGCGGATTG ATGTGGAAGA TAACGGGCCG GGCATTCCGC CTCATTTGCA GGATACGCTG
TTTTACCCGA TGGTCAGCGG CCGCGAAGGT GGCACCGGGC TTGGCTTATC CATCGCCCGT
AATTTGATTG ATCAGCATTC AGGCAAAATT GAATTTACCA GTTGGCCAGG TCATACCGAG
TTCTCGGTTT ACCTGCCTAT CAGGAAATAA
 
Protein sequence
MATGTQPDAG QILNSLINSI LLIDDNLEIH YANPAAQQLL AQSSRKLFGT PLPELLSYFS 
LNIELMQESL EAGQGFTDNE VTLVIDGRSH ILSVTAQRMP DGMILLEMAP MDNQRRLSQE
QLQHAQQVAA RDLVRGLAHE IKNPLGCLRG AAQLLSKALP DPSLLEYTKV IIEQADRLRN
LVDRLLGPQL PGTRVTESIH KVAERVVTLV SMELPDNVRL IRDYDPSLPE LAHDPDQIEQ
VLLNIVRNAL QALGPEGGEI ILRTRTAFQL TLHGERYRLA ARIDVEDNGP GIPPHLQDTL
FYPMVSGREG GTGLGLSIAR NLIDQHSGKI EFTSWPGHTE FSVYLPIRK