| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4319 |
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| Symbol | trkH |
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| ID | 6272198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4037736 |
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| End bp | 4039187 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641728129 |
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| Product | potassium transporter |
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| Protein accession | YP_001882549 |
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| Protein GI | 187731187 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000419761 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTTC GCGCCATTAC CCGAATCGTT GGACTACTGG TCATCTTATT TTCAGGGACC
ATGATTATCC CTGGGCTGGT AGCACTCATC TACCGGGATG GAGCGGGCCG CGCTTTTACC
CAGACCTTTT TTGTCGCCCT CGCCATTGGC TCTATGCTGT GGTGGCCGAA CCGCAAAGAG
AAGGGCGAAC TGAAATCCCG TGAGGGGTTT CTGATAGTGG TGCTGTTTTG GACCGTGCTG
GGTAGTGTCG GTGCGCTCCC TTTTATCTTC TCGGAAAGCC CGAACCTCAC GATTACCGAT
GCGTTTTTTG AATCTTTCTC TGGCCTGACC ACCACCGGGG CCACTACGCT GGTGGGGCTG
GATTCGCTCC CTCATGCCAT CCTCTTTTAT CGCCAGATGC TGCAATGGTT TGGCGGGATG
GGGATCATCG TGTTAGCGGT TGCGATACTG CCTATCCTCG GCGTGGGTGG GATGCAGCTC
TATCGCGCAG AAATGCCCGG CCCGCTGAAA GATAACAAAA TGCGCCCGCG AATTGCGGAA
ACGGCGAAAA CCCTGTGGTT GATTTATGTC TTGCTGACCG TCGCCTGTGC GCTGGCGTTG
TGGTTTGCCG GAATGGATGC CTTTGATGCC ATCGGCCATA GCTTTGCGAC TATCGCTATT
GGCGGCTTCT CGACACATGA TGCCAGTATC GGTTATTTCG ACAGTCCGAC TATTAACACT
ATCATTGCTA TCTTCCTGCT GATCTCCGGT TGTAACTACG GTCTGCACTT TTCACTGTTA
AGTGGGCGTA GTCTGAAGGT TTATTGGCGC GATCCGGAAT TTCGCATGTT TATCGGCGTA
CAGTTTACGC TGGTGGTTAT TTGTACACTC GTACTGTGGT TTCATAATGT CTACAGTTCG
GCGCTGATGA CAATTAACCA GGCGTTTTTC CAGGTGGTAT CGATGGCGAC AACCGCCGGG
TTTACGACTG ACAGCATTGC CCGCTGGCCG CTCTTTTTGC CGGTACTGCT TTTATGTTCA
GCTTTTATCG GCGGTTGCGC CGGGTCAACG GGCGGTGGCC TGAAAGTGAT CCGCATCCTG
CTGCTGTTTA AGCAGGGGAA CCGTGAGCTG AAACGACTGG TGCATCCGAA CGCCGTCTAT
AGCATTAAGC TGGGGAATCG CGCACTGCCG GAACGTATCC TCGAAGCCGT TTGGGGATTT
TTCTCCGCCT ATGCATTGGT GTTTATTGTC AGTATGCTGG CGATTATCGC CACGGGCGTG
GATGATTTTT CTGCCTTTGC CTCAGTTGTT GCGACATTGA ATAACCTGGG GCCAGGGCTT
GGCGTGGTTG CTGATAACTT TACCAGTATG AACCCGGTGG CTAAATGGAT CCTGATTGCC
AACATGCTGT TTGGTCGTCT CGAGGTCTTT ACATTGCTGG TGCTCTTTAC CCCGACTTTC
TGGCGTGAAT GA
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| Protein sequence | MHFRAITRIV GLLVILFSGT MIIPGLVALI YRDGAGRAFT QTFFVALAIG SMLWWPNRKE
KGELKSREGF LIVVLFWTVL GSVGALPFIF SESPNLTITD AFFESFSGLT TTGATTLVGL
DSLPHAILFY RQMLQWFGGM GIIVLAVAIL PILGVGGMQL YRAEMPGPLK DNKMRPRIAE
TAKTLWLIYV LLTVACALAL WFAGMDAFDA IGHSFATIAI GGFSTHDASI GYFDSPTINT
IIAIFLLISG CNYGLHFSLL SGRSLKVYWR DPEFRMFIGV QFTLVVICTL VLWFHNVYSS
ALMTINQAFF QVVSMATTAG FTTDSIARWP LFLPVLLLCS AFIGGCAGST GGGLKVIRIL
LLFKQGNREL KRLVHPNAVY SIKLGNRALP ERILEAVWGF FSAYALVFIV SMLAIIATGV
DDFSAFASVV ATLNNLGPGL GVVADNFTSM NPVAKWILIA NMLFGRLEVF TLLVLFTPTF
WRE
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