Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4252 |
Symbol | uhpC |
ID | 6271940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3973789 |
End bp | 3975108 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641728067 |
Product | regulatory protein UhpC |
Protein accession | YP_001882488 |
Protein GI | 187730063 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCGT TTCTGAAAGC GCCTGCCGAT GCGCCATTAA TGACTGATAA ATATGAAATT GATGCCCGCT ATCGCTACTG GCGTCGGCAT ATTCTGCTGA CCATCTGGCT GGGTTACGCG CTGTTTTACT TCACGCGGAA AAGTTTTAAC GCCGCCGTAC CAGAAATCCT TGCTAACGGC GTGCTCAGCC GTAGCGATAT CGGCCTGTTA GCGACCCTGT TTTACATTAC CTATGGCGTG TCGAAGTTTG TCTCCGGCAT TGTCAGCGAT CGCTCAAATG CCCGTTATTT TATGGGGATA GGGCTTATCG CCACGGGCAT TATCAACATT CTGTTTGGCT TCTCGACGTC GCTATGGGCG TTTGCCGTAC TCTGGGTGCT GAACGCCTTT TTCCAGGGCT GGGGTTCACC GGTGTGTGCG CGTCTGTTAA CGGCCTGGTA TTCACGTACC GAGCGCGGTG GTTGGTGGGC ATTATGGAAC ACGGCGCATA ACGTCGGCGG CGCACTCATT CCCATTGTGA TGGCAGCGGT TGCACTACAT TACGGCTGGC GTGCCGGGAT GATGATTGCT GGTTGTATGG CGATCGTCGT GGGAATTTTT CTCTGCTGGC GGCTGCGCGA TCGCCCGCAG GCGTTAGGTT TACCGGCGGT CGGTGAATGG CGACACGACG CGCTGGAGAT AGCTCAACAA CAAGAAGGGG CAGGGCTGAC GCGTAAAGAG ATCCTCACCA AATATGTGTT GCTGAATCCG TATATCTGGC TGCTTTCGTT TTGCTATGTG CTGGTCTATG TGGTCCGGGC GGCGATCAAC GACTGGGGCA ATTTGTATAT GTCCGAGACG CTGGGCGTCG ATCTGGTCAC GGCGAATACG GCAGTGACGA TGTTTGAACT GGGTGGATTT ATCGGTGCGC TGGTAGCGGG TTGGGGCTCG GACAAATTGT TTAACGGCAA CCGAGGGCCG ATGAATTTGA TTTTCGCCGC CGGAATTTTG CTTTCAGTCG GCTCCCTGTG GCTGATGCCA TTTGCCAGCT ACGTGATGCA GGCAACCTGC TTCTTCACCA TTGGTTTTTT TGTCTTTGGC CCACAGATGT TAATCGGTAT GGCGGCGGCA GAGTGTTCCC ACAAAGAGGC GGCAGGGGCG GCGACGGGGT TTGTCGGCTT GTTTGCTTAT CTGGGGGCGT CGCTTGCTGG TTGGCCGCTG GCGAAAGTAC TCGATACCTG GCACTGGAGC GGATTTTTTG TGGTTATCTC TATCGCCGCC GGGATTTCCG CACTGCTGTT ACTGCCCTTT TTGAACGCCC AGACACCGCG CGAAGCGTGA
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Protein sequence | MLPFLKAPAD APLMTDKYEI DARYRYWRRH ILLTIWLGYA LFYFTRKSFN AAVPEILANG VLSRSDIGLL ATLFYITYGV SKFVSGIVSD RSNARYFMGI GLIATGIINI LFGFSTSLWA FAVLWVLNAF FQGWGSPVCA RLLTAWYSRT ERGGWWALWN TAHNVGGALI PIVMAAVALH YGWRAGMMIA GCMAIVVGIF LCWRLRDRPQ ALGLPAVGEW RHDALEIAQQ QEGAGLTRKE ILTKYVLLNP YIWLLSFCYV LVYVVRAAIN DWGNLYMSET LGVDLVTANT AVTMFELGGF IGALVAGWGS DKLFNGNRGP MNLIFAAGIL LSVGSLWLMP FASYVMQATC FFTIGFFVFG PQMLIGMAAA ECSHKEAAGA ATGFVGLFAY LGASLAGWPL AKVLDTWHWS GFFVVISIAA GISALLLLPF LNAQTPREA
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