Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4235 |
Symbol | |
ID | 6270563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3960159 |
End bp | 3960875 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641728055 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001882476 |
Protein GI | 187730068 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTACA AAAGCATTGC GGAGCGGTTA AGAATTCGAC TTAATTCCGC GGATTTCACG CTAAACAGCC TTCTTCCCGG TGAAAAAAAG TTGGCGGAAG AATTTGCAGT ATCCCGGATG ACCATCCGTA AAGCGATTGA CCTGCTGGTA GCGTGGGGGC TGGTGGTCCG CCGCCACGGC AGCGGCACTT ACCTGGTGCG CAAAGATGTG CTGCATCAAA CCGCCAGCCT GACCGGACTG GTGGAGGTGT TAAAACGGCA GGGAAAAACG GTCACCAGCC AGGTGCTGAT TTTTGAAATC ATGCCTGCGC CTCCGGCCAT TGCCAGCCAG TTACGGATTC AAATCAACGA GCAGATCTAC TTCTCCCGTC GCGTTCGTTT TGTGGAAGGG AAACCGCTGA TGCTGGAAGA CAGCTATATG CCGGTTAAAC TGTTCCGTAA TCTTTCGCTG CAACATCTGG AAGGGTCGAA GTTTGAATAT ATTGAACAAG AGTGTGGGAT TTTGATTGGC GGTAATTATG AAAGCCTGAC GCCGGTGCTC GCCGATAGAC TGCTGGCGCG GCAAATGAAG GTAGCGGAAC ACACGCCACT GCTGCGGATC ACCTCGTTGT CATATAGCGA GAGCGGGGAG TTTTTGAATT ATTCAGTGAT GTTCAGAAAT GCCAGCGAAT ACCAGGTGGA GTACCATTTA CGGCGACTCC ACCCGGAAAA GAGTTAA
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Protein sequence | MIYKSIAERL RIRLNSADFT LNSLLPGEKK LAEEFAVSRM TIRKAIDLLV AWGLVVRRHG SGTYLVRKDV LHQTASLTGL VEVLKRQGKT VTSQVLIFEI MPAPPAIASQ LRIQINEQIY FSRRVRFVEG KPLMLEDSYM PVKLFRNLSL QHLEGSKFEY IEQECGILIG GNYESLTPVL ADRLLARQMK VAEHTPLLRI TSLSYSESGE FLNYSVMFRN ASEYQVEYHL RRLHPEKS
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