Gene SbBS512_E4186 details

Gene Information

• Locus tag: SbBS512_E4186
• Symbol: atpH
• ID: 6270375
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3909901
• End bp: 3910434
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641728007
• Product: F0F1 ATP synthase subunit delta
• Protein accession: YP_001882428
• Protein GI: 187731931
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00000191061
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAT TTATTACGGT AGCTCGCCCC TACGCCAAAG CAGCTTTTGA CTTTGCCGTC 
GAACACCAAA GTGTAGAACG CTGGCAGGAC ATGCTGGCGT TTGCCGCCGA GGTAACCAAA 
AACGAACAAA TGGCAGAGCT TCTCTCTGGC GCGCTTGCGC CAGAAACGCT CGCCGAGTCG 
TTTATCGCAG TTTGTGGTGA GCAACTGGAC GAAAACGGTC AGAACCTGAT TCGGGTAATG 
GCTGAAAATG GTCGTCTTAA CGCGCTCCCG GATGTTCTGG AGCAGTTTAT TCACCTTCGT 
GCCGTGAGTG AGGCTACCGC TGAGGTAGAC GTCATTTCCG CTGCCGCACT GAGTGAACAA 
CAGCTCGCGA AAATTTCTGC TGCGATGGAA AAACGTCTGT CACGCAAAGT TAAGCTGAAT 
TGCAAAATCG ATAAGTCTGT AATGGCAGGC GTTATCATCC GAGCGGGTGA TATGGTCATT 
GACGGCAGCG TACGCGGTCG TCTTGAGCGC CTTGCAGACG TCTTGCAGTC TTAA 

 

Protein sequence

MSEFITVARP YAKAAFDFAV EHQSVERWQD MLAFAAEVTK NEQMAELLSG ALAPETLAES 
FIAVCGEQLD ENGQNLIRVM AENGRLNALP DVLEQFIHLR AVSEATAEVD VISAAALSEQ 
QLAKISAAME KRLSRKVKLN CKIDKSVMAG VIIRAGDMVI DGSVRGRLER LADVLQS