Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4167 |
Symbol | rbsK |
ID | 6270362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3890695 |
End bp | 3891624 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641727992 |
Product | ribokinase |
Protein accession | YP_001882413 |
Protein GI | 187732009 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.895072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACG CAGGCAGCCT CGTTGTTCTT GGCAGCATTA ATGCTGACCA CATTCTTAAT CTTCAATCTT TTCCTACTCC AGGCGAAACC GTAACCGGTA ACCACTATCA GGTTGCATTT GGCGGCAAAG GCGCGAATCA GGCTGTGGCT GCTGGGCGTA GCGGTGCGAA TATCGCGTTT ATTGCCTGTA CGGGTGATGA CAGCATTGGT GAGAGCGTTC GCCAGCAGCT CGCCACTGAT AACATTGATA TTACTCCGGT CAGCGTGATC AAAGGTGAAT CAACAGGTGT GGCGCTGATT TTTGTTAATG GCGAAGGTGA GAATGTCATC GGTATTCATG CCGGCGCTAA TGCTGCCCTT TCCCCGGCGC TGGTGGAAGC GCAACGTGAG CGTATTGCCA ACGCGTCAGC ATTATTAATG CAGCTGGAAT CACCACTCGA AAGTGTGATG GCAGCGGCGA AAATCGCCCA TCAAAATAAG ACTATCGTTG CGCTTAACCC GGCTCCGGCT CGCGAACTTC CTGACGAACT GCTGGCGCTG GTGGACATTA TTACGCCAAA CGAAACGGAA GCAGAAAAGC TCACCGGTAT TCGTGTTGAA AATGATGAAG ATGCAGCGAA GGCGGCGCAG GTACTGCATG AAAAAGGTAT CCGTACTGTA CTGATTACTT TAGGAAGTCG TGGTGTATGG GCTAGCGTGA ATGGTGAAGG TCAGCGCGTT CCTGGATTCC GGGTGCAGGC TGTCGATACC ATTGCTGCCG GAGATACCTT TAACGGCGCG TTAATCACGG CGTTGCTGGA AGAAAAACCA TTGCCAGAGG CGATTCGGTT TGCCCATGCT GCAGCTGCGA TTGCCGTAAC ACGTAAAGGC GCACAACCTT CCGTACCGTG GCGTGAAGAG ATCGACGTAT TTTTAGACAG GCAGAGGTGA
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Protein sequence | MQNAGSLVVL GSINADHILN LQSFPTPGET VTGNHYQVAF GGKGANQAVA AGRSGANIAF IACTGDDSIG ESVRQQLATD NIDITPVSVI KGESTGVALI FVNGEGENVI GIHAGANAAL SPALVEAQRE RIANASALLM QLESPLESVM AAAKIAHQNK TIVALNPAPA RELPDELLAL VDIITPNETE AEKLTGIRVE NDEDAAKAAQ VLHEKGIRTV LITLGSRGVW ASVNGEGQRV PGFRVQAVDT IAAGDTFNGA LITALLEEKP LPEAIRFAHA AAAIAVTRKG AQPSVPWREE IDVFLDRQR
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